RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C17orf98A8MV24 154 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 C15orf65H3BRN8 121 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 MGST3O14880 152 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 MT-ND4LP03901 98 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 P0C879 139 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 IGHV3-43DP0DP04 118 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 EGR1P18146 543 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 AKR1C3P42330 323 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RAB5BP61020 215 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RPS23P62266 143 aaKnown RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 ARL16Q0P5N6 197 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RNF212Q495C1 297 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 KRTCAP3Q53RY4 240 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 KHDC3LQ587J8 217 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 TMEM14EPQ6UXP3 125 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 LRP11Q86VZ4 500 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RFESDQ8TAC1 157 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 PINX1Q96BK5 328 aaKnown RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 CIB3Q96Q77 187 aaPredicted RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 OR2V2Q96R30 315 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 WDR61Q9GZS3 305 aaKnown RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 BIN3Q9NQY0 253 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 JPT1Q9UK76 154 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 PSG11Q9UQ72 335 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 IGKV1D-17A0A075B6S4 117 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 KLK10O43240 276 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
CMSS1-208ENST00000496116 RBMXL2O75526 392 aaKnown RBP9.24□□□□□ -0.93
CMSS1-208ENST00000496116 GPR12P47775 334 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 SELENOVP59797 346 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 ATP6V1FQ16864 119 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 Q3ZCU0 254 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 FAM53AQ6NSI3 398 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-208ENST00000496116 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 PUS1Q9Y606 427 aaKnown RBP eCLIP9.24□□□□□ -0.93
CMSS1-208ENST00000496116 ASPMQ8IZT6 3477 aa9.24□□□□□ -0.93
CMSS1-208ENST00000496116 DEFB108AA8MXU0 73 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
CMSS1-208ENST00000496116 NKX6-1P78426 367 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-208ENST00000496116 ICAM4Q14773 271 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 MSMPQ1L6U9 139 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 OR8G2PQ6IF36 304 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 VHLLQ6RSH7 139 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 HAPLN4Q86UW8 402 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 RBMXL3Q8N7X1 1067 aaKnown RBP9.23□□□□□ -0.93
CMSS1-208ENST00000496116 OR4C12Q96R67 309 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 RAB9BQ9NP90 201 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 RPRMQ9NS64 109 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 KLF2Q9Y5W3 355 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-208ENST00000496116 IGLV3-9A0A075B6K5 115 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 UBE2L5PA0A1B0GUS4 154 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 MARCH11A6NNE9 402 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 LINC00473A8K010 186 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 YPEL1O60688 119 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 CEBPGP53567 150 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 BRWD1-AS2P59051 145 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 CR1LQ2VPA4 569 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 TMEM41BQ5BJD5 291 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF787Q6DD87 383 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 MOGAT3Q86VF5 341 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 FAM57AQ8TBR7 257 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 DTD1Q8TEA8 209 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 MBD3L1Q8WWY6 194 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 TAF15Q92804 592 aaKnown RBP eCLIP9.23□□□□□ -0.93
CMSS1-208ENST00000496116 HIST1H2BAQ96A08 127 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 YPEL2Q96QA6 119 aa9.23□□□□□ -0.93
CMSS1-208ENST00000496116 USF3Q68DE3 2245 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 C1orf196B1AJZ1 125 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 SPRY3O43610 288 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 PTAFRP25105 342 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 LTC4SQ16873 150 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 MORN2Q502X0 79 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 FAM180AQ6UWF9 173 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 OR10P1Q8NGE3 313 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 OR10G4Q8NGN3 311 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 NIPSNAP3BQ9BS92 247 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 DCTN5Q9BTE1 182 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 OR6C3Q9NZP0 311 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 DIDO1Q9BTC0 2240 aaKnown RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 LOC102723971A0A1B0GUV8 181 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 H3BQ15 152 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 TM4SF5O14894 197 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 LY86O95711 162 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 HPRT1P00492 218 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 LHBP01229 141 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 CEACAM8P31997 349 aaPredicted RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 GATA4P43694 442 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms