RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-215	ENST00000495341	RBBP9	O75884	186 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	CRHBP	P24387	322 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	RANBP1	P43487	201 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	TMEM50B	P56557	158 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	CX3CL1	P78423	397 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	MRPS15	P82914	257 aa	Known RBP	12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	RUNX1	Q01196	453 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	FABP5	Q01469	135 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	KIAA0141	Q14154	515 aa	Predicted RBP	12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	HES5	Q5TA89	166 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	MINDY2	Q8NBR6	621 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	OR56B1	Q8NGI3	324 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	FAM3D	Q96BQ1	224 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	AGMAT	Q9BSE5	352 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	VCX3B	Q9H321	246 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	ZNF221	Q9UK13	617 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	RNF150	Q9ULK6	438 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	FOXA2	Q9Y261	457 aa	Predicted RBP	12.86	□□□□□ -0.35
LMNA-215	ENST00000495341		V9GY05	133 aa		12.86	□□□□□ -0.35
LMNA-215	ENST00000495341	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	DENR	O43583	198 aa	Known RBP	12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	LY86	O95711	162 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	CRIP2	P52943	208 aa	Predicted RBP	12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	C2orf76	Q3KRA6	126 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	ASPHD1	Q5U4P2	390 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	TCTEX1D1	Q8N7M0	179 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	OR5AN1	Q8NGI8	311 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	CASTOR1	Q8WTX7	329 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	ALX4	Q9H161	411 aa	Predicted RBP	12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	ACOT13	Q9NPJ3	140 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	METTL1	Q9UBP6	276 aa	Known RBP	12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	SCOC	Q9UIL1	159 aa		12.85	□□□□□ -0.35
LMNA-215	ENST00000495341	FCN1	O00602	326 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	APOA2	P02652	100 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	PLAC9	Q5JTB6	97 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	IZUMO2	Q6UXV1	221 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	CNBD2	Q96M20	576 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	FAM103A1	Q9BTL3	118 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	GAB2	Q9UQC2	676 aa		12.84	□□□□□ -0.35
LMNA-215	ENST00000495341	TMEM272	A0A1B0GTI8	110 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	TRDC	B7Z8K6	153 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	OVOL1	O14753	267 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	SOX15	O60248	233 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	CA2	P00918	260 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	TFAP2A	P05549	437 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	CD3G	P09693	182 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	HSPA13	P48723	471 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	INSL3	P51460	131 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	PSMD7	P51665	324 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	RPS16	P62249	146 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	PLA2G7	Q13093	441 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	PSG5	Q15238	335 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	TBCE	Q15813	527 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	ACTBL2	Q562R1	376 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	C19orf54	Q5BKX5	351 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	UNQ5815/PRO19632	Q6UWF5	114 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF367	Q7RTV3	350 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	PPP1R27	Q86WC6	154 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	DCUN1D4	Q92564	292 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	PTX4	Q96A99	478 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	RAB3C	Q96E17	227 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	TSNAX	Q99598	290 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	RNF5	Q99942	180 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	RDH8	Q9NYR8	311 aa		12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-215	ENST00000495341	IGKV1-6	A0A0C4DH72	117 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	LINC01619	G3V211	115 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341		M0R1X1	148 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	PDCD5	O14737	125 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	BET1	O15155	118 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	SAP30	O75446	220 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	IGKV1-16	P04430	117 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	LGALS1	P09382	135 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	EGR2	P11161	476 aa	Predicted RBP	12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	MYL9	P24844	172 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	CD40LG	P29965	261 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	SLURP1	P55000	103 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	LINC00205	P59089	165 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	PYHIN1	Q6K0P9	492 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	PDPN	Q86YL7	162 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF383	Q8NA42	475 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	OR4A4P	Q8NGN8	299 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	WWC2-AS2	Q96NR7	200 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	RAB22A	Q9UL26	194 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	BLOC1S6	Q9UL45	172 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	LSM4	Q9Y4Z0	139 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-215	ENST00000495341	NUBP2	Q9Y5Y2	271 aa		12.82	□□□□□ -0.36
LMNA-215	ENST00000495341		A0A075B6Q4	140 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	LDLRAD4	O15165	306 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	FABP7	O15540	132 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	PROP1	O75360	226 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	SPDEF	O95238	335 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	IGHV3-11	P01762	117 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	FCGR3A	P08637	254 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	NHLRC4	P0CG21	123 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	GADD45A	P24522	165 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	OR10A3	P58181	314 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms