RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 METTL1Q9UBP6 276 aaKnown RBP9.72□□□□□ -0.85
SKA1-205ENST00000494518 SLC23A1Q9UHI7 598 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 RNF150Q9ULK6 438 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 WASHC3Q9Y3C0 194 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 OR5H14A6NHG9 310 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 TRGV3P03979 118 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 HSPB1P04792 205 aaKnown RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 MAPK3P27361 379 aaPredicted RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 CRIP2P52943 208 aaPredicted RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 TMEM267Q0VDI3 215 aaPredicted RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 UNC119Q13432 240 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 PSG5Q15238 335 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 ACSM3Q53FZ2 586 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 LY6G6FQ5SQ64 297 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 LRRTM1Q86UE6 522 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 DHRSXQ8N5I4 330 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 BPIFB6Q8NFQ5 453 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 GRPEL2Q8TAA5 225 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 ZNF355PQ9NSJ1 428 aa9.71□□□□□ -0.86
SKA1-205ENST00000494518 CNOT2Q9NZN8 540 aaKnown RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.86
SKA1-205ENST00000494518 ANKRD34BA5PLL1 514 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 HSPA12AO43301 675 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 NAPSAO96009 420 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 UBBP0CG47 229 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 IGHV4-30-4P0DP06 118 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 CPEP16870 476 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 CEACAM6P40199 344 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 GLT8D1Q68CQ7 371 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 ZNF880Q6PDB4 577 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 TCTEX1D1Q8N7M0 179 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 OR5T1Q8NG75 326 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 FLYWCH2Q96CP2 140 aaKnown RBP9.7□□□□□ -0.86
SKA1-205ENST00000494518 RHOVQ96L33 236 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 C11orf54Q9H0W9 315 aaPredicted RBP9.7□□□□□ -0.86
SKA1-205ENST00000494518 GHRLQ9UBU3 117 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 PSORS1C1Q9UIG5 152 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 AK3Q9UIJ7 227 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 LRRC42Q9Y546 428 aa9.7□□□□□ -0.86
SKA1-205ENST00000494518 ARPC1BO15143 372 aaKnown RBP9.69□□□□□ -0.86
SKA1-205ENST00000494518 SOCS1O15524 211 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 SLC25A17O43808 307 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 IGKV1-16P04430 117 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 SCTP09683 121 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 RPS16P62249 146 aaKnown RBP9.69□□□□□ -0.86
SKA1-205ENST00000494518 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 P2RY14Q15391 338 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 C1orf100Q5SVJ3 147 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 PYHIN1Q6K0P9 492 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 ADAMTSL5Q6ZMM2 481 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 ANKRD13BQ86YJ7 626 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 C8orf59Q8N0T1 100 aaPredicted RBP9.69□□□□□ -0.86
SKA1-205ENST00000494518 Q8N1Y9 231 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 NANOGP1Q8N7R0 232 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 OR5AN1Q8NGI8 311 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 CITED4Q96RK1 184 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 AGMATQ9BSE5 352 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 TM2D1Q9BX74 207 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 PLEKHJ1Q9NW61 149 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 ADAM30Q9UKF2 790 aa9.69□□□□□ -0.86
SKA1-205ENST00000494518 LCE6AA0A183 80 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 TMEM14DPA8MWL7 114 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 LDLRAD4O15165 306 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 PROP1O75360 226 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 RBBP9O75884 186 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 CD1AP06126 327 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 APELAP0DMC3 54 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 ARSBP15848 533 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 CD40LGP29965 261 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 MC5RP33032 325 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 QRFPP83859 136 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 FXYD3Q14802 87 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 HSD17B12Q53GQ0 312 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 AKIRIN2Q53H80 203 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 MOB1BQ7L9L4 216 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 CEACAM19Q7Z692 300 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 SGPP2Q8IWX5 399 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 ZNF383Q8NA42 475 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 THRSPQ92748 146 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 LPAR5Q9H1C0 372 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 STUB1Q9UNE7 303 aa9.68□□□□□ -0.86
SKA1-205ENST00000494518 C13orf42A0A1B0GVH6 325 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 M0R1X1 148 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 SLC22A1O15245 554 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 CNIH1O95406 144 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 TFAP2AP05549 437 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 PJVKQ0ZLH3 352 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 POC5Q8NA72 575 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 EDARADDQ8WWZ3 215 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 TSNAXQ99598 290 aaKnown RBP9.67□□□□□ -0.86
SKA1-205ENST00000494518 SLA2Q9H6Q3 261 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms