RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF251Q9BRH9 671 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 SEC22CQ9BRL7 303 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 AMMECR1Q9Y4X0 333 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ALG5Q9Y673 324 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 AUP1Q9Y679 476 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 FLNAP21333 2647 aaKnown RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.27□□□□□ -0.921e-6■■□□□ 14.5
MCF2L-231ENST00000494043 TEX13DA0A0J9YY54 714 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 A0A1B0GVG6 124 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 C7orf66A4D0T2 115 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 M0R1X1 148 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 SMAD7O15105 426 aaKnown RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 MPPED1O15442 326 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 PROP1O75360 226 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 TGFAP01135 160 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 HLA-AP01891 365 aaKnown RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 ARG1P05089 322 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 VAMP1P23763 118 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 SUPT4H1P63272 117 aaKnown RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 DHRS2Q13268 280 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 CYB5R2Q6BCY4 276 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 FAM71F2Q6NXP2 309 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 C1orf229Q6ZS94 237 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF833PQ6ZTB9 187 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 LYG2Q86SG7 212 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 TBC1D26Q86UD7 250 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 LHX4Q969G2 390 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 GPHA2Q96T91 129 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 S1PR3Q99500 378 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 HSD17B10Q99714 261 aaKnown RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 NAA60Q9H7X0 242 aa9.27□□□□□ -0.93
MCF2L-231ENST00000494043 GPN1Q9HCN4 374 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-231ENST00000494043 TEX15Q9BXT5 2789 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 MYO9AB2RTY4 2548 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 A0A0A6YYJ9 748 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 C9orf170A2RU37 121 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 RNF212BA8MTL3 300 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 SNRPGP15A8MWD9 76 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 SFT2D2O95562 160 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 F2RP25116 425 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 UBE2E1P51965 193 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 CATR1Q13166 79 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 C11orf88Q6PI97 169 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF66Q6ZN08 573 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 KCTD9Q7L273 389 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 PDZD9Q8IXQ8 264 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 OR52B4Q8NGK2 314 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 OR51H1Q8NH63 302 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 ZNF431Q8TF32 576 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-231ENST00000494043 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
MCF2L-231ENST00000494043 hCG_2014768A0A024R1R8 64 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 A0A1W2PRD5 423 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 A0A1W2PRF3 423 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 A0A1W2PRM7 423 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 LINC00473A8K010 186 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 VGLL3A8MV65 326 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 H0Y980 276 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 CREBL2O60519 120 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 B3GALNT1O75752 331 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 DUS4LO95620 317 aaKnown RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 IFNA2P01563 188 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 ANXA3P12429 323 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 HTR1DP28221 377 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 DUTP33316 252 aaKnown RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 RPL30P62888 115 aaKnown RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 CBX3Q13185 183 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 SLC9A3R2Q15599 337 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 CASTOR1Q8WTX7 329 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 TCTEX1D2Q8WW35 142 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 ADTRPQ96IZ2 230 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 TP53RKQ96S44 253 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 MRPL20Q9BYC9 149 aaKnown RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 OR51J1Q9H342 316 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 LIN7CQ9NUP9 197 aaKnown RBP9.25□□□□□ -0.93
MCF2L-231ENST00000494043 KCNIP3Q9Y2W7 256 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 WNK2Q9Y3S1 2297 aa9.25□□□□□ -0.93
MCF2L-231ENST00000494043 TRAV40A0A0B4J280 105 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 IGHV1-69DA0A0B4J2H0 117 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 CENPVL3A0A0U1RRI6 287 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 LEUTXA8MZ59 168 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 AVPP01185 164 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 IGHV1-69P01742 117 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 CEACAM3P40198 252 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 REG1BP48304 166 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 THBS3P49746 956 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 LINC00205P59089 165 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 DIAPH2-AS1Q14236 149 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 TMEM187Q14656 261 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 SP6Q3SY56 376 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 MIDNQ504T8 468 aa9.24□□□□□ -0.93
MCF2L-231ENST00000494043 LDLRAD2Q5SZI1 272 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms