RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SPTBN1Q01082 2364 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 DOPEY2Q9Y3R5 2298 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 IGHV3-15A0A0B4J1V0 119 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 A0A1B0GW64 132 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 TRDV1A0A1B0GX56 115 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 MBD3L4A6NDZ8 208 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 MBD3L5A6NJ08 208 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 LIPT2A6NK58 231 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF878C9JN71 531 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 DCTN6O00399 190 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 XKRYO14609 159 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 SPRY1O43609 319 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 TRAF3IP2O43734 574 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 PGA4P0DJD7 388 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 PGA5P0DJD9 388 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ATP6V0CP27449 155 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 LCN2P80188 198 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 OR1Q1Q15612 314 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ADGRE4PQ86SQ3 457 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ITLN2Q8WWU7 325 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 CALHM2Q9HA72 323 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 KCNJ16Q9NPI9 418 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 COMMD9Q9P000 198 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 USP9YO00507 2555 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 NCOA6Q14686 2063 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 DOCK7Q96N67 2140 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ZC3H12DA2A288 527 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 H3BQ15 152 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 GEMIN2O14893 280 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 DEGS1O15121 323 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF207O43670 478 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ENTPD6O75354 484 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 NRASP01111 189 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ADH4P08319 380 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 FCGR2AP12318 317 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 GLIPR1P48060 266 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 TCTAP57738 103 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 UBE2NP61088 152 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 MYBPHQ13203 477 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ENTPD8Q5MY95 495 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 OLFML2AQ68BL7 652 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 OR5AK2Q8NH90 309 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 OR2AE1Q8NHA4 323 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 WDR89Q96FK6 387 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 HSH2DQ96JZ2 352 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 POLR2J2Q9GZM3 115 aaKnown RBP9.86□□□□□ -0.83
BRCA1-222ENST00000493919 SLC35B3Q9H1N7 401 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 ZNF226Q9NYT6 803 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 DNAJC27Q9NZQ0 273 aa9.86□□□□□ -0.83
BRCA1-222ENST00000493919 PTPN13Q12923 2485 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 A0A0B4J2E0 115 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 A0A1B0GX12 115 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 IGLC7A0M8Q6 106 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 C9JQL5 133 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 YPEL1O60688 119 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
BRCA1-222ENST00000493919 CELP19835 753 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 SLC6A9P48067 706 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 RND2P52198 227 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 SIRPAP78324 504 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 CDSNQ15517 529 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 HIST3H3Q16695 136 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 CBLL1Q75N03 491 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM217Q8N7C4 229 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 CNEP1R1Q8N9A8 125 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 INO80EQ8NBZ0 244 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-222ENST00000493919 HAVCR2Q8TDQ0 301 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 DCUN1D4Q92564 292 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 YPEL2Q96QA6 119 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 SRD5A3Q9H8P0 318 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 CLN6Q9NWW5 311 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 TAS2R16Q9NYV7 291 aa9.85□□□□□ -0.83
BRCA1-222ENST00000493919 MPDZO75970 2070 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 A0A087WX48 190 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 PRSS37A4D1T9 235 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 TMEM229AB2RXF0 380 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 EEF1E1-BLOC1S5C9J1V9 151 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 DUS4LO95620 317 aaKnown RBP9.84□□□□□ -0.83
BRCA1-222ENST00000493919 ISG15P05161 165 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 WNT2P09544 360 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 KLK2P20151 261 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 FOXF2Q12947 444 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 TAF13Q15543 124 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-222ENST00000493919 TIMM23BQ5SRD1 257 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 OR2T5Q6IEZ7 315 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 OR2T29Q8NH02 315 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 GEMIN6Q8WXD5 167 aaKnown RBP9.84□□□□□ -0.83
BRCA1-222ENST00000493919 APOBEC3DQ96AK3 386 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-222ENST00000493919 MS4A10Q96PG2 267 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 SLC7A7Q9UM01 511 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 MED12LQ86YW9 2145 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 GABARAPH6UMI1 98 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms