RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 NKX2-1P43699 371 aaPredicted RBP11.61□□□□□ -0.55
VCP-207ENST00000493886 HAGHQ16775 308 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 ZNF718Q3SXZ3 478 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 ZNF497Q6ZNH5 498 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 MOB1BQ7L9L4 216 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 H1FOOQ8IZA3 346 aaPredicted RBP11.61□□□□□ -0.55
VCP-207ENST00000493886 ARV1Q9H2C2 271 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 CXXC4Q9H2H0 198 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 SULT1A1P50225 295 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 IZUMO4Q1ZYL8 232 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 CMTM1Q8IZ96 169 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 OR4D5Q8NGN0 318 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 IL1F10Q8WWZ1 152 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 CRYABP02511 175 aaKnown RBP11.6□□□□□ -0.55
VCP-207ENST00000493886 GCH1P30793 250 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 Q6ZR03 302 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 UBALD1Q8TB05 177 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 RCC1LQ96I51 464 aaKnown RBP11.6□□□□□ -0.55
VCP-207ENST00000493886 OR14J1Q9UGF5 321 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 TRAPPC2LQ9UL33 140 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 DOCK11Q5JSL3 2073 aa11.6□□□□□ -0.55
VCP-207ENST00000493886 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
VCP-207ENST00000493886 HAND1O96004 215 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 S100A2P29034 98 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 SELENOHQ8IZQ5 122 aaKnown RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 OR1A1Q9P1Q5 309 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 NPIPB11E5RHQ5 1161 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 CDS2O95674 445 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 CDKN1BP46527 198 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 CEBPDP49716 269 aaPredicted RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 MBNL2Q5VZF2 373 aaKnown RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 ZNF474Q6S9Z5 364 aaPredicted RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 ASCL5Q7RTU5 278 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 A0A1W2PPQ1 181 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 WNT9BO14905 357 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 PGLYRP1O75594 196 aaPredicted RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 TMEM50AO95807 157 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 UCP1P25874 307 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 VAMP2P63027 116 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
VCP-207ENST00000493886 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 FAM180AQ6UWF9 173 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 LHFPL4Q7Z7J7 247 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 SLC35B3Q9H1N7 401 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 TAAR3PQ9P1P4 343 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 MMP24Q9Y5R2 645 aa11.59□□□□□ -0.55
VCP-207ENST00000493886 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 ZNF727A8MUV8 499 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 K7N7A8 449 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 MT-ND4LP03901 98 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 RAB5AP20339 215 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 SOHLH1Q5JUK2 328 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 C1orf174Q8IYL3 243 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 URGCP-MRPS24S4R325 110 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 USF3Q68DE3 2245 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 SERTM2A0A1B0GWG4 89 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 H0Y980 276 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 S100GP29377 79 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 DYNLT3P51808 116 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 OR10V1Q8NGI7 309 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 OR10D4PQ8NGN7 298 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 SNHG12Q9BXW3 62 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 MBNL3Q9NUK0 354 aaKnown RBP11.58□□□□□ -0.56
VCP-207ENST00000493886 WIPI2Q9Y4P8 454 aa11.58□□□□□ -0.56
VCP-207ENST00000493886 CHD3Q12873 2000 aaKnown RBP11.58□□□□□ -0.56
VCP-207ENST00000493886 A0A1W2PN81 502 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 AP4M1O00189 453 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 PSPNO60542 156 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 TIMP3P35625 211 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 CHRNA7P36544 502 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 HOXA4Q00056 320 aaPredicted RBP11.57□□□□□ -0.56
VCP-207ENST00000493886 WDR82Q6UXN9 313 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 TMEM252Q8N6L7 170 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 SPIN2AQ99865 258 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 SPIN2BQ9BPZ2 258 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 PTPRZ1P23471 2315 aaPredicted RBP11.57□□□□□ -0.56
VCP-207ENST00000493886 MAP1BP46821 2468 aaKnown RBP11.57□□□□□ -0.56
VCP-207ENST00000493886 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 C1QTNF9BB2RNN3 333 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 J3KRW8 73 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 F2RP25116 425 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 ZNF83P51522 516 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms