RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PIPOXQ9P0Z9 390 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 SVEP1Q4LDE5 3571 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 CENPXA8MT69 81 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 M0R1X1 148 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 GAPDHP04406 335 aaKnown RBP13.89□□□□□ -0.19
LIME1-208ENST00000493265 IFITM3Q01628 133 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 BAMBIQ13145 260 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 IDO2Q6ZQW0 420 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 MOB3BQ86TA1 216 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
LIME1-208ENST00000493265 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 MALSU1Q96EH3 234 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 PRRT1Q99946 306 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 C19orf24Q9BVV8 132 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 SDHAF2Q9NX18 166 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
LIME1-208ENST00000493265 PLA2G10O15496 165 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 TNFSF12O43508 249 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 FBP1P09467 338 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 CCR6P51684 374 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 AADACL3Q5VUY0 350 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 DRAM1Q8N682 238 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 ZNF645Q8N7E2 425 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
LIME1-208ENST00000493265 BORCS5Q969J3 196 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
LIME1-208ENST00000493265 C5orf30Q96GV9 206 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 GPHA2Q96T91 129 aa13.88□□□□□ -0.19
LIME1-208ENST00000493265 MRPL20Q9BYC9 149 aaKnown RBP13.88□□□□□ -0.19
LIME1-208ENST00000493265 IGHV3-72A0A0B4J1Y9 119 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 LYRM1O43325 122 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 PI3P19957 117 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 CD24P25063 80 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 RAB13P51153 203 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 LINC00205P59089 165 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 GLDNQ6ZMI3 551 aaPredicted RBP13.87□□□□□ -0.19
LIME1-208ENST00000493265 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 ZNF833PQ6ZTB9 187 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 C9orf139Q6ZV77 190 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 SIGLECL1Q8N7X8 197 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 ZNF48Q96MX3 618 aaPredicted RBP13.87□□□□□ -0.19
LIME1-208ENST00000493265 ZNF251Q9BRH9 671 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
LIME1-208ENST00000493265 IGHV1-3A0A0C4DH29 117 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 TIMM23O14925 209 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 ZNF137PP52743 207 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 SCGB2A2Q13296 93 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 PHLDA2Q53GA4 152 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 CCDC144NLQ6NUI1 221 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 OR13C8Q8NGS7 320 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 C7orf50Q9BRJ6 194 aaKnown RBP13.86□□□□□ -0.19
LIME1-208ENST00000493265 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
LIME1-208ENST00000493265 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 PROP1O75360 226 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 SLC22A5O76082 557 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 IGLV2-14P01704 120 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 GNRHRP30968 328 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 ARHGDIBP52566 201 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 ZNF816Q0VGE8 651 aaPredicted RBP13.85□□□□□ -0.19
LIME1-208ENST00000493265 ABCA11PQ4W5N1 156 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 LPCAT3Q6P1A2 487 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 RBMS3Q6XE24 437 aaKnown RBP13.85□□□□□ -0.19
LIME1-208ENST00000493265 SLC38A6Q8IZM9 456 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.85□□□□□ -0.19
LIME1-208ENST00000493265 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 DEDD2Q8WXF8 326 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 SSX3Q99909 188 aa13.85□□□□□ -0.19
LIME1-208ENST00000493265 OOSP1A8MZH6 123 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 GPR31O00270 319 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 TXNL1O43396 289 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 LRRC75BQ2VPJ9 315 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 OR2B11Q5JQS5 317 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 MZT2BQ6NZ67 158 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 OR8H3Q8N146 312 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 TCTEX1D2Q8WW35 142 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 CAPSLQ8WWF8 208 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 DUX5Q96PT3 197 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 RSRP1Q9BUV0 290 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 MEGF9Q9H1U4 602 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 SLC2A8Q9NY64 477 aa13.84□□□□□ -0.19
LIME1-208ENST00000493265 H3BUX3 64 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 H7C2Y5 167 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 IGHV4-59P01825 116 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 RLN1P04808 185 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 BRS3P32247 399 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 BTCP35070 178 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms