RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 HSPB9Q9BQS6 159 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.41
PABPC4-216ENST00000492468 SERPINA7P05543 415 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 EGR1P18146 543 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 RAC3P60763 192 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 COL5A1-AS1Q5SY13 56 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 MYPOPQ86VE0 399 aaPredicted RBP12.5□□□□□ -0.41
PABPC4-216ENST00000492468 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 AGBL5Q8NDL9 886 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
PABPC4-216ENST00000492468 PSMF1Q92530 271 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
PABPC4-216ENST00000492468 C19orf25Q9UFG5 118 aaPredicted RBP12.5□□□□□ -0.41
PABPC4-216ENST00000492468 SYNGR1O43759 233 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 SERF1AO75920 110 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 CRYAAP02489 173 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 ATP5G3P48201 142 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-216ENST00000492468 TMEM249Q2WGJ8 235 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 IL1F10Q8WWZ1 152 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
PABPC4-216ENST00000492468 SIAH2O43255 324 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 SCRG1O75711 98 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 NDUFB4O95168 129 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 DEFA4P12838 97 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 ZNF16P17020 682 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-216ENST00000492468 BATFQ16520 125 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 RIPPLY2Q5TAB7 128 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 FGFRL1Q8N441 504 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 RDH5Q92781 318 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 ASCL3Q9NQ33 180 aa12.49□□□□□ -0.41
PABPC4-216ENST00000492468 MDFIC2A0A1B0GVS7 189 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 PGPEP1LA6NFU8 196 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 F6UZH7 168 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 KRASP01116 189 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 CELA2AP08217 269 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 P0C879 139 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 RAB7AP51149 207 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
PABPC4-216ENST00000492468 MSMO1Q15800 293 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 VN1R17PQ8TDU5 208 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 OR6C1Q96RD1 312 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
PABPC4-216ENST00000492468 TRBV20OR9-2A0A075B6H5 130 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 GJE1A6NN92 205 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 G3V3Y1 287 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 CBR3O75828 277 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 TFPI2P48307 235 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 DLL3Q9NYJ7 618 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
PABPC4-216ENST00000492468 SPEGQ15772 3267 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 CRISP2P16562 243 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 B3GALT5-AS1P59052 145 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 PCOLCEQ15113 449 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 C11orf42Q8N5U0 333 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 Q8N7P7 452 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 Q8N976 141 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 MSL2Q9HCI7 577 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
PABPC4-216ENST00000492468 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
PABPC4-216ENST00000492468 TCF21O43680 179 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 SYNGR4O95473 234 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 CBLN1P23435 193 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 CHRNB4P30926 498 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 CCL7P80098 99 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 DRAM1Q8N682 238 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 ZNF709Q8N972 641 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 OR10P1Q8NGE3 313 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 OR4B1Q8NGF8 309 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 RAB1CQ92928 201 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.41
PABPC4-216ENST00000492468 WDR1O75083 606 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 TDGF1P13385 188 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 KITLGP21583 273 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 TIMP3P35625 211 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 CTRLP40313 264 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 UBE2G2P60604 165 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 TRA2AQ13595 282 aaKnown RBP eCLIP12.46□□□□□ -0.42
PABPC4-216ENST00000492468 SYT13Q7L8C5 426 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 TSTD1Q8NFU3 115 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 SLC35E1Q96K37 410 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.42
PABPC4-216ENST00000492468 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.42
PABPC4-216ENST00000492468 RNF114Q9Y508 228 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms