RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 OR5H14A6NHG9 310 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 NCBP2LA6PVI3 153 aaKnown RBP12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 H3BMQ9 156 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 PEX14O75381 377 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FAM131AQ6UXB0 335 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 Q8N9W7 124 aa12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 RBMXL1Q96E39 390 aaKnown RBP12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 CCDC59Q9P031 241 aaKnown RBP12.94□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 H0YJW9 148 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 PROP1O75360 226 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 PRSS3P35030 304 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 GLDNQ6ZMI3 551 aaPredicted RBP12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 DYNC2LI1Q8TCX1 351 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 WNT10AQ9GZT5 417 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 PLSCR3Q9NRY6 295 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 MRPS7Q9Y2R9 242 aaKnown RBP12.93□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 M0R1X1 148 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 HLA-DQB1P01920 261 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FCER2P06734 321 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 MC5RP33032 325 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 F2RL1P55085 397 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 ACTBP60709 375 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 MMDQ15546 238 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 DRAXINQ8NBI3 349 aaPredicted RBP12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SGMS2Q8NHU3 365 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SNAPC3Q92966 411 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 RASL11BQ9BPW5 248 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 NECAP2Q9NVZ3 263 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SDHAF2Q9NX18 166 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 ANAPC10Q9UM13 185 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 CEPT1Q9Y6K0 416 aa12.92□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 CCDC160A6NGH7 325 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 APOA2P02652 100 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 LUMP51884 338 aaPredicted RBP12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SNX29P2Q8IUI4 249 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 FAM71E2Q8N5Q1 922 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 ZNF383Q8NA42 475 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 H7C2Y5 167 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 J3QRK9 145 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 NBR2O15453 112 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 RGS5O15539 181 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 RBBP9O75884 186 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 TUSC2O75896 110 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 OR5H8P0DN80 308 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 CNTFRP26992 372 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 CDK10Q15131 360 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 ZNF645Q8N7E2 425 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 OR5AP2Q8NGF4 316 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 RITA1Q96K30 269 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 MIXL1Q9H2W2 232 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 SCPEP1Q9HB40 452 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 ADAM30Q9UKF2 790 aa12.9□□□□□ -0.34
MSH5-SAPCD1-206ENST00000491552 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FBXO24O75426 580 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SLC22A5O76082 557 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 IGHG2P01859 326 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 NAT1P18440 290 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 THBS3P49746 956 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LINC00205P59089 165 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PDPNQ86YL7 162 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 NPBQ8NG41 125 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SLC35D1Q9NTN3 355 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 KIAA1456Q9P272 454 aa12.89□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SULT1C2O00338 296 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CTDSP2O14595 271 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 KCNAB3O43448 404 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 NDUFA3O95167 84 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 AADACP22760 399 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FCGR2CP31995 323 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CENPVQ7Z7K6 275 aaPredicted RBP12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 ADTRPQ96IZ2 230 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RNF5Q99942 180 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RBM38Q9H0Z9 239 aaKnown RBP12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 M0QZ24 198 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 TPPPO94811 219 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PPYP01298 95 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CD28P10747 220 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 DUTP33316 252 aaKnown RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RCVRNP35243 200 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms