RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
ARHGEF39-205ENST00000490638 JPT1Q9UK76 154 aa12.21□□□□□ -0.45
ARHGEF39-205ENST00000490638 TP53BP1Q12888 1972 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF39-205ENST00000490638 KCNIP4Q6PIL6 250 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 RPUSD4Q96CM3 377 aaKnown RBP12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 PRSS54Q6PEW0 395 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF66Q6ZN08 573 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 MMD2Q8IY49 270 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 SVBPQ8N300 66 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 GPHA2Q96T91 129 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 METTL1Q9UBP6 276 aaKnown RBP12.21□□□□□ -0.46
ARHGEF39-205ENST00000490638 NAV3Q8IVL0 2385 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 RAB5BP61020 215 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 SLC35B1P78383 322 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF474Q6S9Z5 364 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 OR5R1Q8NH85 324 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 YAE1D1Q9NRH1 226 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF319Q9P2F9 582 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 ELF5Q9UKW6 265 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 KIF26AQ9ULI4 1882 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 FBP1P09467 338 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 M6PRP20645 277 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 ST8SIA2Q92186 375 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 POMT1Q9Y6A1 747 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 LTBP2Q14767 1821 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 HPXP02790 462 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 THBDP07204 575 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 OR8I2Q8N0Y5 310 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 OR10S1Q8NGN2 331 aa12.2□□□□□ -0.46
ARHGEF39-205ENST00000490638 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 Q8WTZ3 238 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 HTTP42858 3142 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 RAB5CP51148 216 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 PCSK4Q6UW60 755 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 RPRMLQ8N4K4 120 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 POM121Q96HA1 1249 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 BCL2L11O43521 198 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 MT-ND4LP03901 98 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 TMEM186Q96B77 213 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 TMEM208Q9BTX3 173 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 GHITMQ9H3K2 345 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 DPM3Q9P2X0 92 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 A0A1B0GU03 582 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 TXNL1O43396 289 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 UNQ5815/PRO19632Q6UWF5 114 aa12.19□□□□□ -0.46
ARHGEF39-205ENST00000490638 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 RXFP4Q8TDU9 374 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 FBXL17Q9UF56 701 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 C1orf196B1AJZ1 125 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 KDF1Q8NAX2 398 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 SAT2Q96F10 170 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 DCTN5Q9BTE1 182 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 C12orf77C9JDV5 145 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 WNT5AP41221 380 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 TMEM30BQ3MIR4 351 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 AUP1Q9Y679 476 aa12.18□□□□□ -0.46
ARHGEF39-205ENST00000490638 AKR1C3P42330 323 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 PRR27Q6MZM9 219 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 LILRB1Q8NHL6 650 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 VSIG4Q9Y279 399 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 SHISA3A0PJX4 238 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 TMEM50BP56557 158 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 RHOBP62745 196 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF672Q499Z4 452 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 HCP5Q6MZN7 132 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 WDFY1Q8IWB7 410 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 PAQR4Q8N4S7 273 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 SSMEM1Q8WWF3 244 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 NABP1Q96AH0 204 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 PRR32B1ATL7 298 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 J3QKU1 62 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 MFNGO00587 321 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 DNM1P46Q6ZS02 220 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 ZNF645Q8N7E2 425 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 SH2D2AQ9NP31 389 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 HIVEP3Q5T1R4 2406 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 CRYGSP22914 178 aa12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-205ENST00000490638 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms