RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 DYRK1AQ13627 763 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 SPANXN2Q5MJ10 180 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 CCBE1Q6UXH8 406 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-210ENST00000489961 OVCH2Q7RTZ1 564 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 OR2T10Q8NGZ9 312 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 SMIM4Q8WVI0 70 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 GIMAP1Q8WWP7 306 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
VPS13D-210ENST00000489961 NABP2Q9BQ15 211 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF251Q9BRH9 671 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 SLC25A33Q9BSK2 321 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 KLK11Q9UBX7 282 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 CUBNO60494 3623 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 OR5H14A6NHG9 310 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF736B4DX44 427 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-210ENST00000489961 M0R1X1 148 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 GSTZ1O43708 216 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-210ENST00000489961 CHST1O43916 411 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 OR2F2O95006 317 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 NDUFA7O95182 113 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 MOSP00540 346 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 PPYP01298 95 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 TBPP20226 339 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 AADACP22760 399 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS13D-210ENST00000489961 MC5RP33032 325 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 RFX2P48378 723 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 RAG2P55895 527 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 HERV-K104P61576 105 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 TSPAN5P62079 268 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 FOXL1Q12952 345 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 EBI3Q14213 229 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 CCDC190Q86UF4 302 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF645Q8N7E2 425 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 OR6Q1Q8NGQ2 317 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 SOSTQ9BQB4 213 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 RANBP3Q9H6Z4 567 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-210ENST00000489961 SDHAF2Q9NX18 166 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 TAS2R8Q9NYW2 309 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 C1RLQ9NZP8 487 aa8.71□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF107Q9UII5 783 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-210ENST00000489961 IGKV1D-13A0A0B4J2D9 117 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 TMEM89A2RUT3 159 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 M0QZK8 103 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 APOA2P02652 100 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 IFNA6P05013 189 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 CSF1P09603 554 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 CT45A6P0DMU7 189 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 CT45A5P0DMU8 189 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 CT45A7P0DMV0 189 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 IGKV1-13P0DP09 117 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 THBS3P49746 956 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 TAS2R19P59542 299 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 FXYD4P59646 89 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 HNF4GQ14541 408 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 PYDC2Q56P42 97 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 RNASE10Q5GAN6 216 aaKnown RBP8.7□□□□□ -1.02
VPS13D-210ENST00000489961 VAX1Q5SQQ9 334 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 DHRS11Q6UWP2 260 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 TMEM17Q86X19 198 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 TMEM229BQ8NBD8 167 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 DRAXINQ8NBI3 349 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-210ENST00000489961 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 OR6F1Q8NGZ6 308 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 SECTM1Q8WVN6 248 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 BORCS5Q969J3 196 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 ADTRPQ96IZ2 230 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 EAF1Q96JC9 268 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF2Q9BSG1 426 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-210ENST00000489961 SLC5A7Q9GZV3 580 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 MOB4Q9Y3A3 225 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 WASHC3Q9Y3C0 194 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 V9GYH0 126 aa8.7□□□□□ -1.02
VPS13D-210ENST00000489961 H0YJW9 148 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 H7C2Y5 167 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 M0QYG6 137 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 PROP1O75360 226 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 TSPAN9O75954 239 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 CD3DP04234 171 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 ETV6P41212 452 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 RELBQ01201 579 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 TAGLNQ01995 201 aaKnown RBP8.69□□□□□ -1.02
VPS13D-210ENST00000489961 CBX3Q13185 183 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 MSMO1Q15800 293 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 CNPY1Q3B7I2 92 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 FBLN7Q53RD9 439 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-210ENST00000489961 GLDNQ6ZMI3 551 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-210ENST00000489961 Q6ZSV7 163 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 OR8H1Q8NGG4 311 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 OR5AN1Q8NGI8 311 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 MOB3AQ96BX8 217 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 MDFIQ99750 246 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 BEX1Q9HBH7 125 aa8.69□□□□□ -1.02
VPS13D-210ENST00000489961 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
VPS13D-210ENST00000489961 A0A1B0GUS0 222 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms