RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 YPEL1O60688 119 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 TSPAN9O75954 239 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 NXPH3O95157 252 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 AVPI1Q5T686 147 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 THNSL2Q86YJ6 484 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 CD177Q8N6Q3 437 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 YPEL2Q96QA6 119 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 CHD3Q12873 2000 aaKnown RBP12.49□□□□□ -0.41
COL9A1-208ENST00000489611 HEATR1Q9H583 2144 aaKnown RBP12.49□□□□□ -0.41
COL9A1-208ENST00000489611 ODAMA1E959 279 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 H3BP45 60 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 LHBP01229 141 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 TMEM267Q0VDI3 215 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-208ENST00000489611 RNF212Q495C1 297 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 KHDC3LQ587J8 217 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 AGMATQ9BSE5 352 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
COL9A1-208ENST00000489611 EGLN1Q9GZT9 426 aa12.49□□□□□ -0.41
COL9A1-208ENST00000489611 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 IGKV1D-17A0A075B6S4 117 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL9A1-208ENST00000489611 METTL15P1P0C7V9 234 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 TMEM30BQ3MIR4 351 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-208ENST00000489611 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 OR2V2Q96R30 315 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 RPS10P5Q9NQ39 176 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 IL19Q9UHD0 177 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 GAB2Q9UQC2 676 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 BSNQ9UPA5 3926 aa12.48□□□□□ -0.41
COL9A1-208ENST00000489611 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 F2RL2O00254 374 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 GPR37O15354 613 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 KRASP01116 189 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 MT-ND4LP03901 98 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 IAPPP10997 89 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 TNFSF4P23510 183 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 NFYBP25208 207 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 SSTR5P35346 364 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 KIR2DS2P43631 304 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 RUNX1Q01196 453 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 GCSAMQ8N6F7 178 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 Q8NA96 180 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
COL9A1-208ENST00000489611 RBKSQ9H477 322 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 ATMQ13315 3056 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 IGF2RP11717 2491 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 PTPRQQ9UMZ3 2332 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 A8MXE2 369 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 M0R036 132 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 SOX15O60248 233 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 RAMP3O60896 148 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 GPR12P47775 334 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 RAB7AP51149 207 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
COL9A1-208ENST00000489611 SLC38A11Q08AI6 406 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 AARDQ4LEZ3 155 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 FAM222BQ8WU58 562 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 C14orf79Q96F83 325 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 ELOVL5Q9NYP7 299 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
COL9A1-208ENST00000489611 ANKRD11Q6UB99 2663 aaPredicted RBP12.46□□□□□ -0.41
COL9A1-208ENST00000489611 COLCA2A8K830 154 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 HPRT1P00492 218 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 MBP02144 154 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 G6PCP35575 357 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.42
COL9A1-208ENST00000489611 MORN2Q502X0 79 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.42
COL9A1-208ENST00000489611 CISD2Q8N5K1 135 aaKnown RBP12.46□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.46□□□□□ -0.42
COL9A1-208ENST00000489611 NUP37Q8NFH4 326 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 ZCCHC14Q8WYQ9 949 aaKnown RBP12.46□□□□□ -0.42
COL9A1-208ENST00000489611 DIRC2Q96SL1 478 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 METRNQ9UJH8 293 aa12.46□□□□□ -0.42
COL9A1-208ENST00000489611 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 MED19A0JLT2 244 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-208ENST00000489611 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms