RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 H7C2Y5 167 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 ITGB1BP1O14713 200 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 RBBP9O75884 186 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 LYL1P12980 280 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 QRFPP83859 136 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 PSG5Q15238 335 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 RBM48Q5RL73 367 aaKnown RBP9.52□□□□□ -0.89
CPSF3-204ENST00000489403 GLT8D1Q68CQ7 371 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 ZNF562Q6V9R5 426 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 MOB1BQ7L9L4 216 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 OR4C12Q96R67 309 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 CITED4Q96RK1 184 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 RNF5Q99942 180 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
CPSF3-204ENST00000489403 HDHD3Q9BSH5 251 aaPredicted RBP9.52□□□□□ -0.89
CPSF3-204ENST00000489403 METTL1Q9UBP6 276 aaKnown RBP9.52□□□□□ -0.89
CPSF3-204ENST00000489403 TENM2Q9NT68 2774 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 PROP1O75360 226 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 IGKV1-16P04430 117 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 TFAP2AP05549 437 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 GNAO1P09471 354 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 HLA-DRB3P79483 266 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 C8orf59Q8N0T1 100 aaPredicted RBP9.51□□□□□ -0.89
CPSF3-204ENST00000489403 Q8N1Y9 231 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 PACRGLQ8N7B6 248 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 DRAXINQ8NBI3 349 aaPredicted RBP9.51□□□□□ -0.89
CPSF3-204ENST00000489403 BPIFB6Q8NFQ5 453 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 KCNG3Q8TAE7 436 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 RSRP1Q9BUV0 290 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 C11orf54Q9H0W9 315 aaPredicted RBP9.51□□□□□ -0.89
CPSF3-204ENST00000489403 SLA2Q9H6Q3 261 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 C8orf4Q9NR00 106 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 PLCXD1Q9NUJ7 323 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 PLEKHJ1Q9NW61 149 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 FKBP14Q9NWM8 211 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 AK3Q9UIJ7 227 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 STUB1Q9UNE7 303 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 HYDINQ4G0P3 5121 aa9.51□□□□□ -0.89
CPSF3-204ENST00000489403 ARPC1BO15143 372 aaKnown RBP9.5□□□□□ -0.89
CPSF3-204ENST00000489403 SLC22A1O15245 554 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 SOCS1O15524 211 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 HSPA12AO43301 675 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 SPDEFO95238 335 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 TRGV3P03979 118 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 CD40LGP29965 261 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 CEACAM6P40199 344 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 LINC00205P59089 165 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 MS4A15Q8N5U1 240 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 ZNF383Q8NA42 475 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 PHYHIPQ92561 330 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 TMED9Q9BVK6 235 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 RIMS4Q9H426 269 aaPredicted RBP9.5□□□□□ -0.89
CPSF3-204ENST00000489403 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
CPSF3-204ENST00000489403 LCE6AA0A183 80 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 FOXI3A8MTJ6 420 aaPredicted RBP9.49□□□□□ -0.89
CPSF3-204ENST00000489403 A8MZ25 164 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 LDLRAD4O15165 306 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 BPNT1O95861 308 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 SCTP09683 121 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 CD37P11049 281 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 CPEP16870 476 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 SRMP19623 302 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 ZBTB25P24278 435 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 RPS16P62249 146 aaKnown RBP9.49□□□□□ -0.89
CPSF3-204ENST00000489403 SSBP2P81877 361 aaPredicted RBP9.49□□□□□ -0.89
CPSF3-204ENST00000489403 HSD17B12Q53GQ0 312 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 PDPNQ86YL7 162 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 OR6M1Q8NGM8 313 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 GRPEL2Q8TAA5 225 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 PTX4Q96A99 478 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 TSNAXQ99598 290 aaKnown RBP9.49□□□□□ -0.89
CPSF3-204ENST00000489403 ELOVL1Q9BW60 279 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 Q9N2K0 584 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 BIRC6Q9NR09 4857 aa9.49□□□□□ -0.89
CPSF3-204ENST00000489403 IGKV1-6A0A0C4DH72 117 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 H3BUA1 57 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 SLC25A17O43808 307 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 CDK1P06493 297 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 UCHL1P09936 223 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 ZP3P21754 424 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 FXYD3Q14802 87 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 CEACAM19Q7Z692 300 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 ANKRD13BQ86YJ7 626 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 SGPP2Q8IWX5 399 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 POC5Q8NA72 575 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 GFI1Q99684 422 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 URM1Q9BTM9 101 aaKnown RBP9.48□□□□□ -0.89
CPSF3-204ENST00000489403 MND1Q9BWT6 205 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 RANGRFQ9HD47 186 aaPredicted RBP9.48□□□□□ -0.89
CPSF3-204ENST00000489403 C12orf4Q9NQ89 552 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 ZNF355PQ9NSJ1 428 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms