RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 IGHV4-61A0A0C4DH41 118 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 IGHV2-70DA0A0C4DH43 119 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 A0A1B0GX30 115 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 DUXBA0A1W2PPF3 345 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 VWC2LB2RUY7 222 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 SMLR1H3BR10 107 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 J3QR06 171 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 ATG12O94817 140 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 C1QBP02746 253 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 RPA2P15927 270 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 COX7A1P24310 79 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
USP11-211ENST00000489111 KIR2DS2P43631 304 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 PRRX1P54821 245 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 ARF6P62330 175 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 OR2B11Q5JQS5 317 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 THOC7Q6I9Y2 204 aaKnown RBP8.2□□□□□ -1.1
USP11-211ENST00000489111 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 SLC35G3Q8N808 338 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 OR13D1Q8NGV5 346 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 CD300LFQ8TDQ1 290 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 TNFRSF14Q92956 283 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 ADTRPQ96IZ2 230 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 C18orf12Q96KH6 178 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 CLEC7AQ9BXN2 247 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 RANBP3Q9H6Z4 567 aaPredicted RBP8.2□□□□□ -1.1
USP11-211ENST00000489111 COMMD9Q9P000 198 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 GAB2Q9UQC2 676 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 TMED3Q9Y3Q3 217 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 AMMECR1Q9Y4X0 333 aaPredicted RBP8.2□□□□□ -1.1
USP11-211ENST00000489111 LRBAP50851 2863 aa8.2□□□□□ -1.1
USP11-211ENST00000489111 CDS2O95674 445 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 THBS3P49746 956 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 AKR1C2P52895 323 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 FGL1Q08830 312 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 IAH1Q2TAA2 248 aaPredicted RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 HIST2H2BCQ6DN03 193 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 LYZL2Q7Z4W2 148 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 SELENOHQ8IZQ5 122 aaKnown RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 SPAG16Q8N0X2 631 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 LRRC75A-AS1Q8N1F1 130 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 PNKDQ8N490 385 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 C11orf42Q8N5U0 333 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 LHFPL5Q8TAF8 219 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 ZNF596Q8TC21 504 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 RRNAD1Q96FB5 475 aaKnown RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 SEC22AQ96IW7 307 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 HEXA-AS1Q9H8Q6 139 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 LPAR2Q9HBW0 351 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 FAM212BQ9NTI7 297 aaPredicted RBP8.19□□□□□ -1.1
USP11-211ENST00000489111 GSKIPQ9P0R6 139 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 ZNRD1Q9P1U0 126 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 KPTNQ9Y664 436 aa8.19□□□□□ -1.1
USP11-211ENST00000489111 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 LINC00473A8K010 186 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 FCGR3BO75015 233 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 APOA2P02652 100 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 PET100P0DJ07 73 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 VDAC1P21796 283 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 USF1P22415 310 aaPredicted RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 PRTN3P24158 256 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 LPAR6P43657 344 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 RPL30P62888 115 aaKnown RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 SRSF4Q08170 494 aaKnown RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 ZNF816Q0VGE8 651 aaPredicted RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 RTL8BQ17RB0 113 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 Q5PR19 223 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 FAM71F2Q6NXP2 309 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 C1orf122Q6ZSJ8 110 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 ZNF833PQ6ZTB9 187 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 Q8N7P7 452 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 DRAXINQ8NBI3 349 aaPredicted RBP8.18□□□□□ -1.1
USP11-211ENST00000489111 BEND2Q8NDZ0 799 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 OR4S2Q8NH73 311 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 TMEM186Q96B77 213 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 HYLS1Q96M11 299 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 NMES1Q9C002 83 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 SIRT7Q9NRC8 400 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 USF3Q68DE3 2245 aa8.18□□□□□ -1.1
USP11-211ENST00000489111 FXYD6-FXYD2A0A087WZ82 144 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 MPTX1A8MV57 137 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP11-211ENST00000489111 RAMP3O60896 148 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 S1PR2O95136 353 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 SCGB1D2O95969 90 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 EPHA1P21709 976 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 GZMKP49863 264 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 NKX2-5P52952 324 aaPredicted RBP8.17□□□□□ -1.1
USP11-211ENST00000489111 DVL1P1P54792 670 aaPredicted RBP8.17□□□□□ -1.1
USP11-211ENST00000489111 S100A10P60903 97 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 ERVK-16P61578 105 aa8.17□□□□□ -1.1
USP11-211ENST00000489111 PRB3Q04118 309 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms