RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 DLL3Q9NYJ7 618 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 OR1A1Q9P1Q5 309 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 SH3BGRL2Q9UJC5 107 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 LAMP3Q9UQV4 416 aa16.52■□□□□ 0.24
HMG20B-213ENST00000488973 PPBPP02775 128 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 IL6RP08887 468 aaPredicted RBP16.51■□□□□ 0.23
HMG20B-213ENST00000488973 GALR1P47211 349 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 PAX5Q02548 391 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 IQCJQ1A5X6 159 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 SPANXN5Q5MJ07 72 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 GCNT2Q8N0V5 402 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 FAM58AQ8N1B3 248 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 IL1F10Q8WWZ1 152 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 OR5B12Q96R08 314 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 IGKV3D-15A0A087WSY6 115 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 PPP5D1E7EU14 171 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 H7BYZ3 331 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 FOLR3P41439 243 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 PDLIM4P50479 330 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 FAM3BP58499 235 aaPredicted RBP16.51■□□□□ 0.23
HMG20B-213ENST00000488973 SLC38A11Q08AI6 406 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 TESK1Q15569 626 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 NUDT10Q8NFP7 164 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 ZNF488Q96MN9 340 aa16.51■□□□□ 0.23
HMG20B-213ENST00000488973 UBE2L5PA0A1B0GUS4 154 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 XKRY2A2RUG3 117 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 PSMB3P49720 205 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 FAM180AQ6UWF9 173 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 TMEM14EPQ6UXP3 125 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 TIPARPQ7Z3E1 657 aaKnown RBP16.5■□□□□ 0.23
HMG20B-213ENST00000488973 PRRG4Q9BZD6 226 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 PILRBQ9UKJ0 227 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 PPP1R3CQ9UQK1 317 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 A0A096LPE4 126 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 A0A1W2PPZ6 126 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 OR5B21A6NL26 309 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 IGKV1D-33P01593 117 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 IGKV1-33P01594 117 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 IRF2P14316 349 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 GFRA1P56159 465 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 MOB1BQ7L9L4 216 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 WDFY3Q8IZQ1 3526 aa16.5■□□□□ 0.23
HMG20B-213ENST00000488973 GZMHP20718 246 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 SELENOTP62341 195 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 ZXDAP98168 799 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 TMEM170AQ8WVE7 144 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 ANAPC16Q96DE5 110 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 MPC1Q9Y5U8 109 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 HRASP01112 189 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 GDF1P27539 372 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 KLF3P57682 345 aaPredicted RBP16.49■□□□□ 0.23
HMG20B-213ENST00000488973 GNG3P63215 75 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 ZNF66Q6ZN08 573 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.49■□□□□ 0.23
HMG20B-213ENST00000488973 NECAP1Q8NC96 275 aa16.49■□□□□ 0.23
HMG20B-213ENST00000488973 CTXND1A0A1B0GTU2 59 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 NKX6-3A6NJ46 265 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 ZNHIT1O43257 154 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 NGFP01138 241 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 ERVS71-1P61550 626 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 TEX38Q6PEX7 206 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 OR1K1Q8NGR3 316 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
HMG20B-213ENST00000488973 RPUSD4Q96CM3 377 aaKnown RBP16.48■□□□□ 0.23
HMG20B-213ENST00000488973 PKIBQ9C010 78 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 PARLQ9H300 379 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 MSL2Q9HCI7 577 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 MANBALQ9NQG1 85 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 ANKRD30BLA7E2S9 258 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 TUBG1P23258 451 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 OR5I1Q13606 314 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 C9orf135Q5VTT2 229 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 DEPPQ9NTK1 212 aa16.48■□□□□ 0.23
HMG20B-213ENST00000488973 PDGFBP01127 241 aaPredicted RBP16.47■□□□□ 0.23
HMG20B-213ENST00000488973 IGHEP01854 428 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 CCL4P13236 92 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 ZNF16P17020 682 aaPredicted RBP16.47■□□□□ 0.23
HMG20B-213ENST00000488973 RPL29P47914 159 aaKnown RBP16.47■□□□□ 0.23
HMG20B-213ENST00000488973 ATP6V1FQ16864 119 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 POM121L2Q96KW2 1035 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 RBM7Q9Y580 266 aaKnown RBP16.47■□□□□ 0.23
HMG20B-213ENST00000488973 OR4A8P0C604 315 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 P2RY6Q15077 328 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 Q6P435 159 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 ACSM6Q6P461 480 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 OR5T1Q8NG75 326 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 PCGF1Q9BSM1 259 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 OR51I2Q9H344 312 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 KCNS2Q9ULS6 477 aa16.47■□□□□ 0.23
HMG20B-213ENST00000488973 C20orf202A1L168 122 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 ZNF503-AS2A6NEH8 195 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 HLA-BQ31612 363 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 ACTL10Q5JWF8 245 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 OR8G2PQ6IF36 304 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 FGFRL1Q8N441 504 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 RNF212BA8MTL3 300 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 TYMSP04818 313 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 ARR3P36575 388 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 SRP14P37108 136 aaKnown RBP16.46■□□□□ 0.23
HMG20B-213ENST00000488973 Q0VFX4 171 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms