RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 CIDEAO60543 219 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 PRR27Q6MZM9 219 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 WASHC3Q9Y3C0 194 aa13.78□□□□□ -0.2
MCF2L-229ENST00000488765 CLEC18AA5D8T8 446 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 C3orf79P0CE67 100 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 GNB1P62873 340 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 SRPXP78539 464 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 STPG3Q8N7X2 389 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 CLEC18CQ8NCF0 446 aa13.77□□□□□ -0.2
MCF2L-229ENST00000488765 NEIL1Q96FI4 390 aaPredicted RBP13.77□□□□□ -0.2
MCF2L-229ENST00000488765 A0A0J9YY10 115 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 SMPD2O60906 423 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 CBR3O75828 277 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 TYMSP04818 313 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 GPX1P07203 203 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 ARL4DP49703 201 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 MRPS21P82921 87 aaKnown RBP13.77□□□□□ -0.21
MCF2L-229ENST00000488765 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.21
MCF2L-229ENST00000488765 SARAFQ96BY9 339 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 LRRC61Q9BV99 259 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 TM2D1Q9BX74 207 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 A6NCN8 305 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 CLDN1O95832 211 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 CTRLP40313 264 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 ABHD3Q8WU67 409 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
MCF2L-229ENST00000488765 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 IL36RNQ9UBH0 155 aa13.77□□□□□ -0.21
MCF2L-229ENST00000488765 TIMM8BQ9Y5J9 83 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-229ENST00000488765 TRBV20OR9-2A0A075B6H5 130 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 PLCXD3Q63HM9 321 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
MCF2L-229ENST00000488765 SFRP2Q96HF1 295 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 HS3ST6Q96QI5 342 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 PLEK2Q9NYT0 353 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 NAT8BQ9UHF3 227 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 IGHV3-15A0A0B4J1V0 119 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 TMEM150CB9EJG8 249 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 ZNF253O75346 499 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 PI4KAP42356 2102 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 SSC4DQ8WTU2 575 aa13.76□□□□□ -0.21
MCF2L-229ENST00000488765 SEPSECSQ9HD40 501 aaKnown RBP13.76□□□□□ -0.21
MCF2L-229ENST00000488765 TNRC18O15417 2968 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-229ENST00000488765 FUT6P51993 359 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 TFF3Q07654 80 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
MCF2L-229ENST00000488765 ZNF841Q6ZN19 808 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 WDR61Q9GZS3 305 aaKnown RBP13.75□□□□□ -0.21
MCF2L-229ENST00000488765 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 H0Y8G0 127 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 SNAI2O43623 268 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 SYNGR2O43760 224 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 KIAA0895LQ68EN5 471 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-229ENST00000488765 FAM58AQ8N1B3 248 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
MCF2L-229ENST00000488765 FSCN3Q9NQT6 498 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 ZNF318Q5VUA4 2279 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 IGHV5-51A0A0C4DH38 117 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 SLC22A20A6NK97 555 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 DHRS3O75911 302 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 MALLQ13021 153 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 NSDHLQ15738 373 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 LRRC75BQ2VPJ9 315 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 BORCS8Q96FH0 119 aa13.75□□□□□ -0.21
MCF2L-229ENST00000488765 CD300LBA8K4G0 201 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 TOMM40O96008 361 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 PPBPP02775 128 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 PPOXP50336 477 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 LCN2P80188 198 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 SLC38A11Q08AI6 406 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 OR8I2Q8N0Y5 310 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 IFI44Q8TCB0 444 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 DDIT4LQ96D03 193 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 TMEM56Q96MV1 263 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 TMEM56-RWDD3S4R434 201 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 ADAMTS9Q9P2N4 1935 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 YLPM1P49750 1951 aaKnown RBP13.74□□□□□ -0.21
MCF2L-229ENST00000488765 PRR19A6NJB7 356 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 ZNF83P51522 516 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 EFNA3P52797 238 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 OCC1Q8TAD7 63 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 PIGCQ92535 297 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 HSPB7Q9UBY9 170 aa13.74□□□□□ -0.21
MCF2L-229ENST00000488765 A0A1W2PN81 502 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 GAGE12BA1L429 117 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 HSBP1L1C9JCN9 74 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 HS3ST1O14792 307 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 GNG7O60262 68 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 NUDT3O95989 172 aa13.73□□□□□ -0.21
MCF2L-229ENST00000488765 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-229ENST00000488765 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
MCF2L-229ENST00000488765 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms