RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TPST1O60507 370 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SHOX2O60902 331 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 PFDN1O60925 122 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MED6O75586 246 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 CLIC3O95833 236 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 IGKV3-20P01619 116 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 BGLAPP02818 100 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ADRA2AP08913 450 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 FOLR2P14207 255 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 HLA-GP17693 338 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ZP3P21754 424 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SLC2A5P22732 501 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SRP14P37108 136 aaKnown RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TGM4P49221 684 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 CX3CR1P49238 355 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SLC18A1P54219 525 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TAS2R41P59536 307 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 RPS23P62266 143 aaKnown RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ADARB1P78563 741 aaKnown RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 KRTAP1-1Q07627 177 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 CD47Q08722 323 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 HNRNPA0Q13151 305 aaKnown RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 AQP6Q13520 282 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 FLOT2Q14254 428 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MAD2L1BPQ15013 274 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 PRR4Q16378 134 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 GSG1Q2KHT4 349 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TIMM50Q3ZCQ8 353 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 COX19Q49B96 90 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ULK3Q6PHR2 472 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 DHRS4L2Q6PKH6 230 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 UNQ9370/PRO34162Q6UXP9 181 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MYPOPQ86VE0 399 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SLC30A8Q8IWU4 369 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MSRB3Q8IXL7 192 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ENTHD1Q8IYW4 607 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 SPAG16Q8N0X2 631 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ZCCHC24Q8N2G6 241 aaKnown RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 C10orf111Q8N326 155 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 OR5J2Q8NH18 312 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 OR52E5Q8NH55 327 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 OR10A6Q8NH74 314 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 C10orf105Q8TEF2 133 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM158Q8WZ71 300 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 STMN2Q93045 179 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MAGEB18Q96M61 343 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 OR2M2Q96R28 347 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 HOPXQ9BPY8 73 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ECSITQ9BQ95 431 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 COPS4Q9BT78 406 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MAP1LC3CQ9BXW4 147 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 LINC00470Q9BZP3 86 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 PLEKHA1Q9HB21 404 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 NOX3Q9HBY0 568 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 BCL2L10Q9HD36 194 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ARMC1Q9NVT9 282 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 NECAP2Q9NVZ3 263 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MDFICQ9P1T7 246 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 NDUFAF1Q9Y375 327 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 V9GY05 133 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TRRAPQ9Y4A5 3859 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 TRBV9A0A0B4J1U6 114 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 KBTBD11-OT1A0A1B0GTJ5 212 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 ISPDA4D126 451 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 A6NIZ1 184 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 KRTAP16-1A8MUX0 517 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 FTCDNL1E5RQL4 147 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 LYNX1G3V0Z9 82 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 RPL36A-HNRNPH2H7BZ11 118 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 SIRPB1O00241 398 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 MRASO14807 208 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 XRCC2O43543 280 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 CHP2O43745 196 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 NPIPB7O75200 414 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 GATBO75879 557 aaKnown RBP2.49□□□□□ -2.01
GPNMB-212ENST00000487890 UBL3O95164 117 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 FARS2O95363 451 aaKnown RBP2.49□□□□□ -2.01
GPNMB-212ENST00000487890 TNFAIP8O95379 198 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 SNAP29O95721 258 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF682O95780 498 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 TCRBP04435 133 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 LYNX1P0DP58 116 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 GPX2P18283 190 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 PMCHP20382 165 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 CRABP1P29762 137 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 KDELR2P33947 212 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 APLNRP35414 380 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 ARR3P36575 388 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 GUCA1AP43080 201 aaPredicted RBP2.49□□□□□ -2.01
GPNMB-212ENST00000487890 OR1E2P47887 323 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 NPBWR2P48146 333 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 TFPI2P48307 235 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 PPOXP50336 477 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 SLC25A1P53007 311 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 CRISP1P54107 249 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 KLF3P57682 345 aaPredicted RBP2.49□□□□□ -2.01
GPNMB-212ENST00000487890 TAS2R60P59551 318 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 KRTAP10-11P60412 298 aa2.49□□□□□ -2.01
GPNMB-212ENST00000487890 RAP1BP61224 184 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms