RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TUSC2O75896 110 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 SAA2P0DJI9 122 aaPredicted RBP8.58□□□□□ -1.04
TOP3B-216ENST00000487485 CD24P25063 80 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 GPR12P47775 334 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 DYNLT3P51808 116 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 LUMP51884 338 aaPredicted RBP8.58□□□□□ -1.04
TOP3B-216ENST00000487485 DYRK1AQ13627 763 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF79Q15937 498 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 LY6EQ16553 131 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 RPL39P5Q59GN2 51 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 DHRS11Q6UWP2 260 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF833PQ6ZTB9 187 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 TGIF2LXQ8IUE1 241 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 OR8H3Q8N146 312 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 TMEM229BQ8NBD8 167 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 OR5R1Q8NH85 324 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 GIMAP1Q8WWP7 306 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 S1PR3Q99500 378 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF251Q9BRH9 671 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 THAP7Q9BT49 309 aaPredicted RBP8.58□□□□□ -1.04
TOP3B-216ENST00000487485 OR2D2Q9H210 308 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 PTTG2Q9NZH5 202 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 GAB2Q9UQC2 676 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 TIMM23O14925 209 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 TXNL1O43396 289 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 PROP1O75360 226 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 CD3DP04234 171 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 CSF1P09603 554 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 AADACP22760 399 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 TAS2R19P59542 299 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 TSPAN5P62079 268 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 ACTBL2Q562R1 376 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF660Q6AZW8 331 aaPredicted RBP8.57□□□□□ -1.04
TOP3B-216ENST00000487485 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 LINC00299Q6ZSB3 139 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 Q8N402 240 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 DRAM1Q8N682 238 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 OR56B4Q8NH76 319 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 CAPSLQ8WWF8 208 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 CFHR4Q92496 578 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF2Q9BSG1 426 aaPredicted RBP8.57□□□□□ -1.04
TOP3B-216ENST00000487485 CHIAQ9BZP6 476 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 TINAGL1Q9GZM7 467 aaPredicted RBP8.57□□□□□ -1.04
TOP3B-216ENST00000487485 SDHAF2Q9NX18 166 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 TAS2R8Q9NYW2 309 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF107Q9UII5 783 aaPredicted RBP8.57□□□□□ -1.04
TOP3B-216ENST00000487485 VPREB3Q9UKI3 123 aa8.57□□□□□ -1.04
TOP3B-216ENST00000487485 RBMX2Q9Y388 322 aaKnown RBP8.57□□□□□ -1.04
TOP3B-216ENST00000487485 IGHV3-72A0A0B4J1Y9 119 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 IGKV1D-13A0A0B4J2D9 117 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 FAM90A9PA6NNJ1 464 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 M0QYG6 137 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 PPYP01298 95 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 CD74P04233 296 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
TOP3B-216ENST00000487485 FAM106CPP0CH98 169 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 CT45A6P0DMU7 189 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 CT45A5P0DMU8 189 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 CT45A7P0DMV0 189 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 IGKV1-13P0DP09 117 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 TBPP20226 339 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 CD1BP29016 333 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 FXYD4P59646 89 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF45Q02386 682 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 HABP2Q14520 560 aaPredicted RBP8.56□□□□□ -1.04
TOP3B-216ENST00000487485 RNASE10Q5GAN6 216 aaKnown RBP8.56□□□□□ -1.04
TOP3B-216ENST00000487485 VAX1Q5SQQ9 334 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 STEAP1BQ6NZ63 245 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 C16orf87Q6PH81 154 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 THNSL2Q86YJ6 484 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF645Q8N7E2 425 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.56□□□□□ -1.04
TOP3B-216ENST00000487485 OR6F1Q8NGZ6 308 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 SECTM1Q8WVN6 248 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 NABP2Q9BQ15 211 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 SRRQ9GZT4 340 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 TCF19Q9Y242 345 aa8.56□□□□□ -1.04
TOP3B-216ENST00000487485 ANKRD20A5PA0PJZ0 165 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 A6NDX4 124 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 SLC22A5O76082 557 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 RAB3DO95716 219 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 IGKV1D-33P01593 117 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 IGKV1-33P01594 117 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 IFNA6P05013 189 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 SNRNP70P08621 437 aaKnown RBP8.55□□□□□ -1.04
TOP3B-216ENST00000487485 AKAIN1P0CW23 69 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 HERV-K104P61576 105 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 SRSF4Q08170 494 aaKnown RBP8.55□□□□□ -1.04
TOP3B-216ENST00000487485 LSAMPQ13449 338 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 HES1Q14469 280 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 CCBE1Q6UXH8 406 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-216ENST00000487485 GLDNQ6ZMI3 551 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-216ENST00000487485 TMEM17Q86X19 198 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 TMEM219Q86XT9 240 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 GDPD1Q8N9F7 314 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 DRAXINQ8NBI3 349 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-216ENST00000487485 OR4D10Q8NGI6 311 aa8.55□□□□□ -1.04
TOP3B-216ENST00000487485 C5orf30Q96GV9 206 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms