RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 CACNA1IQ9P0X4 2223 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 CXorf65A6NEN9 183 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 SAXO1Q8IYX7 474 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 RBKSQ9H477 322 aa12.68□□□□□ -0.38
EPHB4-206ENST00000487222 EPOPA6NHQ4 379 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
EPHB4-206ENST00000487222 IGHMP01871 453 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 STARD6P59095 220 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 RTP5Q14D33 572 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 GBGT1Q8N5D6 347 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 REG1BP48304 166 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 APCDD1LQ8NCL9 501 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 CD8AP01732 235 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 ZNF137PP52743 207 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 SHISA3A0PJX4 238 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 H0YL77 283 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
EPHB4-206ENST00000487222 GCGP01275 180 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 DANCRP0C864 163 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 UCP3P55916 312 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 C19orf48Q6RUI8 117 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 MS4A3Q96HJ5 214 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 CEACAM18A8MTB9 384 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 SPTBP11277 2137 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
EPHB4-206ENST00000487222 RND3P61587 244 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 LINC00518Q8N0U6 118 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 OR8A1Q8NGG7 326 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 OR52M1Q8NGK5 317 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 ZNF714Q96N38 554 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 PCGF1Q9BSM1 259 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 MC5RP33032 325 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 UNC119Q13432 240 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 SLC35E4Q6ICL7 350 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 MRPL37Q9BZE1 423 aaKnown RBP12.66□□□□□ -0.38
EPHB4-206ENST00000487222 PRDM14Q9GZV8 571 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 XIRP1Q702N8 1843 aaKnown RBP12.66□□□□□ -0.38
EPHB4-206ENST00000487222 COX5BP10606 129 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 EGR4Q05215 589 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 POC1AQ8NBT0 407 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 CDC42EP3Q9UKI2 254 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 HS3ST3B1Q9Y662 390 aa12.66□□□□□ -0.38
EPHB4-206ENST00000487222 APELAP0DMC3 54 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 COL5A1-AS1Q5SY13 56 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 DPF1Q92782 380 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 MPTX1A8MV57 137 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
EPHB4-206ENST00000487222 CCL8P80075 99 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 IBA57Q5T440 356 aaKnown RBP12.65□□□□□ -0.38
EPHB4-206ENST00000487222 CCL13Q99616 98 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 CISD1Q9NZ45 108 aaKnown RBP12.65□□□□□ -0.38
EPHB4-206ENST00000487222 RHBDL1O75783 438 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 LINC00869P0C866 280 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 CRYBA2P53672 197 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 OR1P1Q8NH06 330 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 SCNM1Q9BWG6 230 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 WNT2BQ93097 391 aa12.65□□□□□ -0.38
EPHB4-206ENST00000487222 PARP14Q460N5 1801 aa12.65□□□□□ -0.39
EPHB4-206ENST00000487222 PTPRFP10586 1907 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 THY1P04216 161 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 IGKV3-11P04433 115 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 PSMB2P49721 201 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM187Q14656 261 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 LRRC75BQ2VPJ9 315 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 SAP25Q8TEE9 199 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 CTSBP07858 339 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 PRNTQ86SH4 94 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 TNFRSF9Q07011 255 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF441Q8N8Z8 693 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 LSM10Q969L4 123 aaKnown RBP12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.64□□□□□ -0.39
EPHB4-206ENST00000487222 IGHV3-21A0A0B4J1V1 117 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF826PQ6ZT77 177 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 RBM14Q96PK6 669 aaKnown RBP12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 ZFP30Q9Y2G7 519 aa12.64□□□□□ -0.39
EPHB4-206ENST00000487222 MYO16Q9Y6X6 1858 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms