RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TMUB2Q71RG4 321 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 ZNF767PQ75MW2 155 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 OR8B3Q8NGG8 313 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 LHFPL5Q8TAF8 219 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 TCTEX1D2Q8WW35 142 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 DCUN1D4Q92564 292 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 LSM10Q969L4 123 aaKnown RBP5.82□□□□□ -1.48
SF3A3-206ENST00000487062 RRNAD1Q96FB5 475 aaKnown RBP5.82□□□□□ -1.48
SF3A3-206ENST00000487062 NEIL1Q96FI4 390 aaPredicted RBP5.82□□□□□ -1.48
SF3A3-206ENST00000487062 ABHD14BQ96IU4 210 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 OR8B2Q96RD0 313 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 ABHD14AQ9BUJ0 271 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 ARL6Q9H0F7 186 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 CHODLQ9H9P2 273 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 SDHAF2Q9NX18 166 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 MBD2Q9UBB5 411 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 CTSZQ9UBR2 303 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 RPUSD1Q9UJJ7 312 aaKnown RBP5.82□□□□□ -1.48
SF3A3-206ENST00000487062 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
SF3A3-206ENST00000487062 TNFSF18Q9UNG2 199 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 CACNA1BQ00975 2339 aa5.82□□□□□ -1.48
SF3A3-206ENST00000487062 NBASA2RRP1 2371 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-206ENST00000487062 A0A1B0GU03 582 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 KANTRA0A1W2PQU2 76 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 CLEC18AA5D8T8 446 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 E5RGE8 158 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ST8SIA3O43173 380 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 C1QL1O75973 258 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 SLC25A6P12236 298 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 LYL1P12980 280 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 PVALBP20472 110 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-206ENST00000487062 OMGP23515 440 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 SSTR2P30874 369 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 KIR2DS2P43631 304 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 LPAR6P43657 344 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 NKX2-1P43699 371 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-206ENST00000487062 EFNA4P52798 201 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 AKR1C2P52895 323 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ID3Q02535 119 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ZNF273Q14593 569 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 AVPI1Q5T686 147 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 TMEM200BQ69YZ2 307 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 TCF23Q7RTU1 214 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 FAM219AQ8IW50 185 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 KCNRGQ8N5I3 272 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 CLEC18CQ8NCF0 446 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 OR8H1Q8NGG4 311 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 C17orf50Q8WW18 174 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ADTRPQ96IZ2 230 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 GPHA2Q96T91 129 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 S1PR3Q99500 378 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 AGMATQ9BSE5 352 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 PLEKHA2Q9HB19 425 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 C19orf12Q9NSK7 152 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 NSG2Q9Y328 171 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 PRELID3BQ9Y3B1 194 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 LSM5Q9Y4Y9 91 aaKnown RBP5.81□□□□□ -1.48
SF3A3-206ENST00000487062 IGSF10Q6WRI0 2623 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 USP24Q9UPU5 2620 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 DOCK11Q5JSL3 2073 aa5.81□□□□□ -1.48
SF3A3-206ENST00000487062 ROS1P08922 2347 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 PKDREJQ9NTG1 2253 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 hCG_1809904A0A1W2PP81 198 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 A0A1W2PPE2 198 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 A0A1W2PPR1 153 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 A0A1W2PR64 198 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 A0A1W2PRV1 198 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 K7EPK0 472 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 M0R1X1 148 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 WRBO00258 174 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 RAB29O14966 203 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 BCL2L11O43521 198 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 DEDDO75618 318 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 IFNA7P01567 189 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 DUTP33316 252 aaKnown RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 CDKN1AP38936 164 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 GPR6P46095 362 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 THBS3P49746 956 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 GNG10P50151 68 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 AP2S1P53680 142 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 GNB2P62879 340 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 UBA52P62987 128 aaKnown RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 EIF4EBP1Q13541 118 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 ZNF585BQ52M93 769 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 NMSQ5H8A3 153 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 CT45A1Q5HYN5 189 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 PRAMEF5Q5TYX0 476 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 FAM53AQ6NSI3 398 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-206ENST00000487062 BTNL3Q6UXE8 466 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 SLC51BQ86UW2 128 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 FOXRED2Q8IWF2 684 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 SPAG16Q8N0X2 631 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 FGFRL1Q8N441 504 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 FAM71E2Q8N5Q1 922 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 C8orf31Q8N9H6 132 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 ZNF439Q8NDP4 499 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 OR4D5Q8NGN0 318 aa5.8□□□□□ -1.48
SF3A3-206ENST00000487062 OR1S1Q8NH92 325 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms