RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CT45A3Q8NHU0 189 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 SAP25Q8TEE9 199 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 SMIM4Q8WVI0 70 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 NDRG1Q92597 394 aaKnown RBP4.52□□□□□ -1.69
COPS3-209ENST00000486810 TVP23CQ96ET8 276 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 SDSLQ96GA7 329 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 OR4F4Q96R69 305 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 RASL10BQ96S79 203 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 GPER1Q99527 375 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 FEVQ99581 238 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 C19orf24Q9BVV8 132 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 POLR2J2Q9GZM3 115 aaKnown RBP4.52□□□□□ -1.69
COPS3-209ENST00000486810 PARLQ9H300 379 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 RDH14Q9HBH5 336 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 BPIFA1Q9NP55 256 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 DCAF13Q9NV06 445 aaKnown RBP4.52□□□□□ -1.69
COPS3-209ENST00000486810 IL36AQ9UHA7 158 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 ZNF443Q9Y2A4 671 aaPredicted RBP4.52□□□□□ -1.69
COPS3-209ENST00000486810 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
COPS3-209ENST00000486810 DDX60LQ5H9U9 1706 aaKnown RBP4.52□□□□□ -1.69
COPS3-209ENST00000486810 TET3O43151 1660 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SCN8AQ9UQD0 1980 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 A0A0B4J2E0 115 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 A0A1B0GX12 115 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 A0A1W2PR77 199 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 IRGMA1A4Y4 181 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR2T8A6NH00 312 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 H0YJW9 148 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 K7EN84 100 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 M0R1X1 148 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PRKNO60260 465 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 NPIPB7O75200 414 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PROSCO94903 275 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SOX14O95416 240 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SFT2D2O95562 160 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PMS2P2O95744 297 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 EML2O95834 649 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 TBX6O95947 436 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 GAPDHP04406 335 aaKnown RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 HLA-DPB1P04440 258 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SP1P08047 785 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SPINK8P0C7L1 97 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 FAM106CPP0CH98 169 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 MMP9P14780 707 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PGCP20142 388 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 NTSP30990 170 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PYCR1P32322 319 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 LPAR6P43657 344 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 ZNF121P58317 390 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 SNRPGP62308 76 aaKnown RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 SEC11AP67812 179 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PSG7Q13046 419 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 ADIRFQ15847 76 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 FAM106AQ4KMX7 169 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OTPQ5XKR4 325 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 HBMQ6B0K9 141 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR2T5Q6IEZ7 315 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 Q6Q795 121 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 LINC00336Q6ZUF6 198 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 Q6ZVH6 145 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 FAM19A5Q7Z5A7 132 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 ZNF547Q8IVP9 402 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SAXO1Q8IYX7 474 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 BLIDQ8IZY5 108 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR2L13Q8N349 312 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 KIR3DL3Q8N743 410 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 ZNF709Q8N972 641 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR8G5Q8NG78 346 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR6T1Q8NGN1 323 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR13A1Q8NGR1 328 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR2T29Q8NH02 315 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 ZNRF4Q8WWF5 429 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 BAALCQ8WXS3 180 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 DDIT4LQ96D03 193 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 OR4C12Q96R67 309 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 TSSK6Q9BXA6 273 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SPANXDQ9BXN6 97 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 IFI27L2Q9H2X8 130 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 NMRAL1Q9HBL8 299 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 HES4Q9HCC6 221 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 PRTFDC1Q9NRG1 225 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 SDR39U1Q9NRG7 319 aaPredicted RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 MRPL17Q9NRX2 175 aaKnown RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 RPRMQ9NS64 109 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 POLDIP2Q9Y2S7 368 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 RPL36Q9Y3U8 105 aaKnown RBP4.51□□□□□ -1.69
COPS3-209ENST00000486810 PKD1L3Q7Z443 1732 aa4.51□□□□□ -1.69
COPS3-209ENST00000486810 TRAV8-6A0A0B4J262 113 aa4.5□□□□□ -1.69
COPS3-209ENST00000486810 A0A1W2PPI3 338 aa4.5□□□□□ -1.69
COPS3-209ENST00000486810 H3BRM9 83 aa4.5□□□□□ -1.69
COPS3-209ENST00000486810 CLDN14O95500 239 aa4.5□□□□□ -1.69
COPS3-209ENST00000486810 SEC11BP0C7V7 166 aa4.5□□□□□ -1.69
COPS3-209ENST00000486810 LINC00869P0C866 280 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms