RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 LYG1Q8N1E2 194 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 MARCH1Q8TCQ1 289 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 ZFAND2BQ8WV99 257 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 RTN4IP1Q8WWV3 396 aaPredicted RBP12.78□□□□□ -0.36
APOE-205ENST00000485628 DDB2Q92466 427 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
APOE-205ENST00000485628 SLC5A7Q9GZV3 580 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 C5orf66Q9H5L9 145 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 MCUBQ9NWR8 336 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
APOE-205ENST00000485628 A0A1W2PRD5 423 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 A0A1W2PRF3 423 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 A0A1W2PRM7 423 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 VGLL3A8MV65 326 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 CTSDP07339 412 aaPredicted RBP12.77□□□□□ -0.37
APOE-205ENST00000485628 CT45A6P0DMU7 189 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 CT45A5P0DMU8 189 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 CT45A7P0DMV0 189 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.37
APOE-205ENST00000485628 CEACAM3P40198 252 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
APOE-205ENST00000485628 DYNLT3P51808 116 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 FXYD4P59646 89 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.37
APOE-205ENST00000485628 SLC38A6Q8IZM9 456 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 BCL6BQ8N143 479 aaPredicted RBP12.77□□□□□ -0.37
APOE-205ENST00000485628 ZDHHC22Q8N966 263 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 CFHR4Q92496 578 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 ZNF221Q9UK13 617 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 ZFHX3Q15911 3703 aa12.77□□□□□ -0.37
APOE-205ENST00000485628 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 GPR31O00270 319 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 HSD17B6O14756 317 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 PGLYRP1O75594 196 aaPredicted RBP12.76□□□□□ -0.37
APOE-205ENST00000485628 GAPDHP04406 335 aaKnown RBP12.76□□□□□ -0.37
APOE-205ENST00000485628 TCRBP04435 133 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 EPHA1P21709 976 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 IL3RAP26951 378 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 GPR12P47775 334 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 LGALS4P56470 323 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 LINC00205P59089 165 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 DHODHQ02127 395 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 AANATQ16613 207 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 MZT2BQ6NZ67 158 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 OR8H3Q8N146 312 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 OR5AN1Q8NGI8 311 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 TOMM40LQ969M1 308 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 NABP2Q9BQ15 211 aa12.76□□□□□ -0.37
APOE-205ENST00000485628 IGHV1-3A0A0C4DH29 117 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 LINC00473A8K010 186 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 TXNL1O43396 289 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 DEFA1P59665 94 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 DEFA3P59666 94 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
APOE-205ENST00000485628 BAMBIQ13145 260 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 EBI3Q14213 229 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 POC5Q8NA72 575 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 ZNF48Q96MX3 618 aaPredicted RBP12.75□□□□□ -0.37
APOE-205ENST00000485628 S1PR3Q99500 378 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
APOE-205ENST00000485628 SLC2A9Q9NRM0 540 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 CDC42EP3Q9UKI2 254 aa12.75□□□□□ -0.37
APOE-205ENST00000485628 RBM7Q9Y580 266 aaKnown RBP12.75□□□□□ -0.37
APOE-205ENST00000485628 SSX2Q16385 188 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 ZNF66Q6ZN08 573 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 RPEQ96AT9 228 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 MRPL20Q9BYC9 149 aaKnown RBP12.74□□□□□ -0.37
APOE-205ENST00000485628 ALX4Q9H161 411 aaPredicted RBP12.74□□□□□ -0.37
APOE-205ENST00000485628 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 HILPDAQ9Y5L2 63 aa12.74□□□□□ -0.37
APOE-205ENST00000485628 FAM240BA0A1B0GVZ2 78 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 H0YJW9 148 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 M0R1X1 148 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 MPPED1O15442 326 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 PTTG1O95997 202 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 PI3P19957 117 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 PAX6P26367 422 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 CD1BP29016 333 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 CCDC144NLQ6NUI1 221 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 THNSL2Q86YJ6 484 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 ADAD2Q8NCV1 583 aaKnown RBP12.73□□□□□ -0.37
APOE-205ENST00000485628 ADTRPQ96IZ2 230 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 GPHA2Q96T91 129 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms