RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 C1DQ13901 141 aaKnown RBP0.6□□□□□ -2.31
VPS50-217ENST00000485140 OR4D1Q15615 310 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 SCGB1D4Q6XE38 83 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 CNEP1R1Q8N9A8 125 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 SPACA4Q8TDM5 124 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 TNFAIP8L1Q8WVP5 186 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 LRRC39Q96DD0 335 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 SMIM12Q96EX1 92 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 SLC35G5Q96KT7 338 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 HBEGFQ99075 208 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 DOHHQ9BU89 302 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 MS4A12Q9NXJ0 267 aa0.6□□□□□ -2.31
VPS50-217ENST00000485140 PLCH2O75038 1416 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 IGHV3-64A0A075B6Q5 118 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 TRBV6-5A0A0K0K1A5 114 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 ZNF705FA8MVS1 300 aaPredicted RBP0.59□□□□□ -2.31
VPS50-217ENST00000485140 F5H5K5 113 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 TXNDC9O14530 226 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 GSTZ1O43708 216 aaPredicted RBP0.59□□□□□ -2.31
VPS50-217ENST00000485140 NDUFB2O95178 105 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 HBZP02008 142 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 LIMS3P0CW19 117 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 LIMS4P0CW20 117 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 OR13C7P0DN81 318 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 CCL3P10147 92 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 CFL1P23528 166 aaKnown RBP0.59□□□□□ -2.31
VPS50-217ENST00000485140 ALDH3A1P30838 453 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 CD79BP40259 229 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 CRATP43155 626 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 STC1P52823 247 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 TAS2R30P59541 319 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 RAB8AP61006 207 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 DAD1P61803 113 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 FBXO48Q5FWF7 155 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 TMEM31Q5JXX7 168 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 PLCZ1Q86YW0 608 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 RORBQ92753 470 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 ACY3Q96HD9 319 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 CST9LQ9H4G1 147 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 STK38LQ9Y2H1 464 aa0.59□□□□□ -2.31
VPS50-217ENST00000485140 GRIN2BQ13224 1484 aa0.59□□□□□ -2.32
VPS50-217ENST00000485140 KIAA0232Q92628 1395 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 IGKV2D-26A0A0A0MRZ7 120 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 COPEO14579 308 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 SGCEO43556 437 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 ARL6IP5O75915 188 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 TNFAIP8O95379 198 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 NPYP01303 97 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 C1QCP02747 245 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 CRYBA1P05813 215 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 BPGMP07738 259 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 CCL2P13500 99 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 CRYBB3P26998 211 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 HSPA9P38646 679 aaKnown RBP0.58□□□□□ -2.32
VPS50-217ENST00000485140 CA7P43166 264 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 EMP1P54849 157 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 OR10A3P58181 314 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 XIAPP98170 497 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 NNATQ16517 81 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 CLEC12BQ2HXU8 276 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 ZNF791Q3KP31 576 aaPredicted RBP0.58□□□□□ -2.32
VPS50-217ENST00000485140 OR10K2Q6IF99 312 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 DRAM2Q6UX65 266 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 UNQ6190/PRO20217Q6UXQ8 127 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 SLC7A6Q92536 515 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 SERPINB11Q96P15 392 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 OR7D2Q96RA2 312 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 SLC2A9Q9NRM0 540 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 MED9Q9NWA0 146 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 TAAR3PQ9P1P4 343 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 MRM2Q9UI43 246 aaKnown RBP0.58□□□□□ -2.32
VPS50-217ENST00000485140 ANGPT4Q9Y264 503 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 MAP3K19Q56UN5 1328 aa0.58□□□□□ -2.32
VPS50-217ENST00000485140 BHLHE40O14503 412 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 KLRC4O43908 158 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 PVALBP20472 110 aaPredicted RBP0.57□□□□□ -2.32
VPS50-217ENST00000485140 ADORA1P30542 326 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 KCNJ3P48549 501 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 DLX6P56179 175 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 PLCXD2Q0VAA5 305 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 STX3Q13277 289 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TMEM155Q4W5P6 130 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 KIAA2026Q5HYC2 2103 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 RBM48Q5RL73 367 aaKnown RBP0.57□□□□□ -2.32
VPS50-217ENST00000485140 ATP6V1C2Q8NEY4 427 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 CLDND2Q8NHS1 167 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 SMCR5Q8TEV8 140 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 ASB17Q8WXJ9 295 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TLCD1Q96CP7 247 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TMEM56Q96MV1 263 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 CYTH2Q99418 400 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TMEM208Q9BTX3 173 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TMEM222Q9H0R3 208 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 ENPP5Q9UJA9 477 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 SCN9AQ15858 1988 aa0.57□□□□□ -2.32
VPS50-217ENST00000485140 TRAV8-1A0A0A6YYK1 113 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 MDFIC2A0A1B0GVS7 189 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 SYNGR1O43759 233 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 MRPS14O60783 128 aaKnown RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 ZNF737O75373 536 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms