RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 FBXL15Q9H469 300 aa11.85□□□□□ -0.51
HLA-DQB1-208ENST00000484729 SLC23A1Q9UHI7 598 aa11.85□□□□□ -0.51
HLA-DQB1-208ENST00000484729 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
HLA-DQB1-208ENST00000484729 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 H7C2Y5 167 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 RRHO14718 337 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 OVOL1O14753 267 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 RAB29O14966 203 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 GSTP1P09211 210 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 UNC119Q13432 240 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 MINDY2Q8NBR6 621 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 ABHD14BQ96IU4 210 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 TM2D1Q9BX74 207 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 PARP12Q9H0J9 701 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 PLEKHJ1Q9NW61 149 aa11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-208ENST00000484729 OR5H14A6NHG9 310 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SOX15O60248 233 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SAP30O75446 220 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 NAPSAO96009 420 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 GP9P14770 177 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CPEP16870 476 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SLURP1P55000 103 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CX3CL1P78423 397 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 NEDD8Q15843 81 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 UBE2UQ5VVX9 321 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ZNF660Q6AZW8 331 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CEACAM19Q7Z692 300 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TSPAN14Q8NG11 270 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
HLA-DQB1-208ENST00000484729 A0A087WXM4 84 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TMEM14DPA8MWL7 114 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 LINC01619G3V211 115 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 H0YJW9 148 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SLC22A1O15245 554 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 HSPA12AO43301 675 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 BPNT1O95861 308 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SRMP19623 302 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PSMA1P25786 263 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 MC5RP33032 325 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CRIP2P52943 208 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RPS25P62851 125 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 HLA-DRB3P79483 266 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TPBGQ13641 420 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TRAM1Q15629 374 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 C19orf54Q5BKX5 351 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 OR6M1Q8NGM8 313 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 DLX4Q92988 240 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TMEM203Q969S6 136 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CLCC1Q96S66 551 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 HDHD3Q9BSH5 251 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 URM1Q9BTM9 101 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TOLLIPQ9H0E2 274 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 OR1A1Q9P1Q5 309 aa11.82□□□□□ -0.52
HLA-DQB1-208ENST00000484729 IGHV4OR15-8A0A075B7B6 117 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 A0A087WW49 117 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 FCN1O00602 326 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RBBP9O75884 186 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CEACAM6P40199 344 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 QRFPP83859 136 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 P2RY14Q15391 338 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 UNQ5815/PRO19632Q6UWF5 114 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 EDARADDQ8WWZ3 215 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ARPC1AQ92747 370 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 FAM103A1Q9BTL3 118 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 LPAR5Q9H1C0 372 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PLGRKTQ9HBL7 147 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 METTL1Q9UBP6 276 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 AK3Q9UIJ7 227 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RNF150Q9ULK6 438 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 GAB2Q9UQC2 676 aa11.81□□□□□ -0.52
HLA-DQB1-208ENST00000484729 LDLRAD4O15165 306 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SOCS1O15524 211 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 JTBO76095 146 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 IGHV3-11P01762 117 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 UCHL1P09936 223 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ZBTB25P24278 435 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 VEGFCP49767 419 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PYHIN1Q6K0P9 492 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms