RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ZNF236Q9UL36 1845 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 C2orf83Q53S99 150 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 LINC00696Q6ZRV3 163 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 SLC45A1Q9Y2W3 748 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 SIRT4Q9Y6E7 314 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 CASP8AP2Q9UKL3 1982 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 ITGB1BP1O14713 200 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 DCDP81605 110 aaKnown RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 RTL10Q7L3V2 364 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 NAT6Q93015 286 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 ZNF391Q9UJN7 358 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 J3QR06 171 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 LSM6P62312 80 aaKnown RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 TCF23Q7RTU1 214 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 SPSB4Q96A44 273 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 EGLN1Q9GZT9 426 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 RUNX3Q13761 415 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 NR2C2APQ86WQ0 139 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 KLK15Q9H2R5 256 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 DDX60LQ5H9U9 1706 aaKnown RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 K7ESF4 209 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 ATP5IP56385 69 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 GAGE1Q13065 139 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 RBPMS2Q6ZRY4 209 aaKnown RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 OR4D11Q8NGI4 311 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 RTN4RL2Q86UN3 420 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 CXorf67Q86X51 503 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-207ENST00000483888 J3KRW8 73 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 CTSVO60911 334 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 CENPWQ5EE01 88 aa8.94□□□□□ -0.98
COL12A1-207ENST00000483888 ZNF865P0CJ78 1059 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 TCF24Q7RTU0 167 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 ARHGAP21Q5T5U3 1957 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 A0A1W2PPE3 182 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 TMEM250H0YL14 139 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 RFESDQ8TAC1 157 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 C5orf66Q9H5L9 145 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 ARAP2Q8WZ64 1704 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 ODAMA1E959 279 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 GOSR1O95249 250 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 DLK2Q6UY11 383 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 SLX1AQ9BQ83 275 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 PIGYQ3MUY2 71 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 DSPPQ9NZW4 1301 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 HOXA3O43365 443 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 CD46P15529 392 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 CTLA4P16410 223 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 TMEM211Q6ICI0 200 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 SCRG1O75711 98 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 IGHV3-13P01766 116 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 IGHV3-7P01780 117 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 FOXA3P55318 350 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 CXorf66Q5JRM2 361 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 SFTPA2Q8IWL1 248 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 SFTPA1Q8IWL2 248 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 ABHD14BQ96IU4 210 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 NPVFQ9HCQ7 196 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 DNAJB12Q9NXW2 375 aaKnown RBP8.93□□□□□ -0.98
COL12A1-207ENST00000483888 PNLIPP16233 465 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 ALKBH6Q3KRA9 238 aa8.93□□□□□ -0.98
COL12A1-207ENST00000483888 RRHO14718 337 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 MPDU1O75352 247 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 GPR6P46095 362 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 CLDND2Q8NHS1 167 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 INTS1Q8N201 2190 aaKnown RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 DUSP2Q05923 314 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 IGHV3-20A0A0C4DH32 117 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 CRYBB3P26998 211 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 SRSF5Q13243 272 aaKnown RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 GGTLC2Q14390 218 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 C10orf111Q8N326 155 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 WDR31Q8NA23 367 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 FRG2CA6NGY1 282 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 NTN1O95631 604 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 REG4Q9BYZ8 158 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 C2orf68Q2NKX9 166 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 KLHDC9Q8NEP7 349 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 WBP2Q969T9 261 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 ZNF479Q96JC4 524 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 RASL11BQ9BPW5 248 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 CLLU1OSQ5K130 101 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 C9orf153Q5TBE3 101 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 SSBP3Q9BWW4 388 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-207ENST00000483888 SDF2L1Q9HCN8 221 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 GPR132Q9UNW8 380 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 HDGFL3Q9Y3E1 203 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 CXCL1P09341 107 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 PLAC1Q9HBJ0 212 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 NGBQ9NPG2 151 aa8.92□□□□□ -0.98
COL12A1-207ENST00000483888 H0Y980 276 aa8.91□□□□□ -0.98
COL12A1-207ENST00000483888 NRG2O14511 850 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms