RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ADH4P08319 380 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 PET100P0DJ07 73 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZP3P21754 424 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 VDAC1P21796 283 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 TNFSF4P23510 183 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF134P52741 427 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 LOXL3P58215 753 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ERVFRD-1P60508 538 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 EIF4EBP1Q13541 118 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CR1LQ2VPA4 569 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 TCF23Q7RTU1 214 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ERGIC1Q969X5 290 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 SDSLQ96GA7 329 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 GAFA1Q96PS6 74 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 MAGT1Q9H0U3 335 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ITPR2Q14571 2701 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMEM50AO95807 157 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 IGKV1-5P01602 117 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CD55P08174 381 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CGB3P0DN86 165 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CGB7P0DN87 165 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 COL8A1P27658 744 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 RPL12P30050 165 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF273Q14593 569 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 OR2B11Q5JQS5 317 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 BTNL3Q6UXE8 466 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 SSX8Q7RTT4 187 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 CCL17Q92583 94 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 RBMXL1Q96E39 390 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 AKR1E2Q96JD6 320 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 TOLLIPQ9H0E2 274 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 SAP30LQ9HAJ7 183 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 SEBOXQ9HB31 216 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 NGBQ9NPG2 151 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 KCNJ16Q9NPI9 418 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
CDC42SE1-204ENST00000483763 RAI1Q7Z5J4 1906 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 A1L4Q6 167 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 ST8SIA3O43173 380 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 SERPINE2P07093 398 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 GZMHP20718 246 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMEM33P57088 247 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 UBA52P62987 128 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 SRPXP78539 464 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TFF3Q07654 80 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 C17orf58Q2M2W7 97 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TEX36Q5VZQ5 186 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 RPL7L1Q6DKI1 246 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF788Q6ZQV5 615 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 C1orf229Q6ZS94 237 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF561Q8N587 486 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZNF645Q8N7E2 425 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 LEAP2Q969E1 77 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 GPR146Q96CH1 333 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 LRRC46Q96FV0 321 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 SMIM3Q9BZL3 60 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 C11orf1Q9H5F2 150 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 CISD1Q9NZ45 108 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 PSG11Q9UQ72 335 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 DSCAML1Q8TD84 2053 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 CLEC18AA5D8T8 446 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 LINC00473A8K010 186 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 KIAA1324LA8MWY0 1029 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TSPAN4O14817 238 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 MMP23AO75900 390 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 CD3EP07766 207 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 TNFRSF1AP19438 455 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 EPHA1P21709 976 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 HTD2P86397 168 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 NHLH2Q02577 135 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 MORN2Q502X0 79 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 CLEC18CQ8NCF0 446 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 STOML3Q8TAV4 291 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 REG4Q9BYZ8 158 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 MED9Q9NWA0 146 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 SDHAF2Q9NX18 166 aa7.32□□□□□ -1.24
CDC42SE1-204ENST00000483763 NAV2Q8IVL1 2488 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 SPINT2O43291 252 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZG16O60844 167 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 PITX3O75364 302 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 S100A9P06702 114 aaKnown RBP7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 WNT2P09544 360 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 MUC1P15941 1255 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 LOXP28300 417 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 APOBEC3AP31941 199 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 ID3Q02535 119 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 BAP18Q8IXM2 172 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 ODF3L1Q8IXM7 274 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMED6Q8WW62 240 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 WFDC1Q9HC57 220 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 FBXL17Q9UF56 701 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 POMT1Q9Y6A1 747 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 NOTCH2Q04721 2471 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 A0A1W2PPE3 182 aa7.31□□□□□ -1.24
CDC42SE1-204ENST00000483763 C17orf98A8MV24 154 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms