RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CALB1P05937 261 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 C8orf88P0DMB2 117 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 HIST1H1CP16403 213 aaKnown RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 CD36P16671 472 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 PSMB9P28065 219 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 CLDN12P56749 244 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 OR4D2P58180 307 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 SMCO1Q147U7 214 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 TMEM176BQ3YBM2 270 aaPredicted RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 C10orf91Q5T1B1 145 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 HES3Q5TGS1 186 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 TCF24Q7RTU0 167 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 SCXQ7RTU7 201 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 ATP6V1C2Q8NEY4 427 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 OR11L1Q8NGX0 322 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 OR10J5Q8NHC4 309 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 FAAP24Q9BTP7 215 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 TMEM109Q9BVC6 243 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 TLNRD1Q9H1K6 362 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 FGFR1OP2Q9NVK5 253 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 SLC23A2Q9UGH3 650 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 RPUSD1Q9UJJ7 312 aaKnown RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 MTCH2Q9Y6C9 303 aa2.39□□□□□ -2.03
SF3B1-210ENST00000482158 DNMT1P26358 1616 aaKnown RBP2.39□□□□□ -2.03
SF3B1-210ENST00000482158 FLT4P35916 1363 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 RFX7Q2KHR2 1363 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 KIF24Q5T7B8 1368 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 EFCAB10A6NFE3 127 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 MPZL2O60487 215 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 GUSBP08236 651 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 UCHL3P15374 230 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 CRABP1P29762 137 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 AP2S1P53680 142 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-210ENST00000482158 FAM3AP98173 230 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 RAB31Q13636 194 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 FLOT2Q14254 428 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 PYCR3Q53H96 274 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 BRMS1LQ5PSV4 323 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 OGFRL1Q5TC84 451 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-210ENST00000482158 C9orf84Q5VXU9 1444 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 LPCAT4Q643R3 524 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 FAM45BPQ6NSW5 357 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 CD200R1LQ6Q8B3 271 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 TMPPEQ6ZT21 453 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 CLVS1Q8IUQ0 354 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-210ENST00000482158 C12orf29Q8N999 325 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 OR1M1Q8NGA1 313 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 LMX1AQ8TE12 382 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 LZICQ8WZA0 190 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 TLCD1Q96CP7 247 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 MRAP2Q96G30 205 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 OR8B2Q96RD0 313 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 DDA1Q9BW61 102 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 MRPS26Q9BYN8 205 aaKnown RBP2.38□□□□□ -2.03
SF3B1-210ENST00000482158 ARL6Q9H0F7 186 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 PCBD2Q9H0N5 130 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 OR51E2Q9H255 320 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 SLC2A9Q9NRM0 540 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 NDUFAF1Q9Y375 327 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 ARL5AQ9Y689 179 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 ZNF532Q9HCE3 1301 aa2.38□□□□□ -2.03
SF3B1-210ENST00000482158 TRPM3Q9HCF6 1732 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 A0A1B0GV72 72 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 ZNF878C9JN71 531 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 F5H5T6 163 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 KPNA3O00505 521 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 CXCR6O00574 342 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 BIRC5O15392 142 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 RAB36O95755 333 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 IFNA16P05015 189 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 CRHP06850 196 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 NBEAP1P0C6P0 100 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 KCNE1P15382 129 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 MAGEA12P43365 314 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 MP68P56378 58 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 KRR1Q13601 381 aaKnown RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 PHF13Q86YI8 300 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 MSRB3Q8IXL7 192 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 TMEM35BQ8NCS4 154 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 OR51D1Q8NGF3 324 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 OR5L1Q8NGL2 311 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 C20orf166-AS1Q96NR2 134 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 HBEGFQ99075 208 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 CDCA4Q9BXL8 241 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 METTL17Q9H7H0 456 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-210ENST00000482158 PARVAQ9NVD7 372 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 ARL2BPQ9Y2Y0 163 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 KIF1BO60333 1816 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 ATAD5Q96QE3 1844 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 MYO5BQ9ULV0 1848 aa2.37□□□□□ -2.03
SF3B1-210ENST00000482158 PTPRGP23470 1445 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 IGKV1-12A0A0C4DH73 117 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 SMIM9A6NGZ8 99 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 MIF4GDA9UHW6 222 aaKnown RBP2.36□□□□□ -2.03
SF3B1-210ENST00000482158 AZIN1O14977 448 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 KLRC4O43908 158 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms