RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 GLAP06280 429 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 BDKRB2P30411 391 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 POLR2IP36954 125 aaKnown RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 APOC4P55056 127 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 FLOT2Q14254 428 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 SYS1Q8N2H4 156 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 THRSPQ92748 146 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 CIB1Q99828 191 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 THTPAQ9BU02 230 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 ISG20L2Q9H9L3 353 aaKnown RBP11.15□□□□□ -0.62
HDAC6-224ENST00000481929 ABRACLQ9P1F3 81 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 TCRBV3S1A0A5B6 114 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 FAM90A23PA8MXZ1 464 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 E9PI62 339 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 EDN2P20800 178 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 FUT3P21217 361 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 RIPK1Q13546 671 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 ANKRD55Q3KP44 614 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 LHFPL3Q86UP9 236 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 GPR148Q8TDV2 347 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 ABHD14BQ96IU4 210 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 ZNF184Q99676 751 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-224ENST00000481929 SULT4A1Q9BR01 284 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 GABARAPL1Q9H0R8 117 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
HDAC6-224ENST00000481929 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
HDAC6-224ENST00000481929 TUSC2O75896 110 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 CALB2P22676 271 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 FASP25445 335 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 GBX2P52951 348 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-224ENST00000481929 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 HMGN3Q15651 99 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-224ENST00000481929 ZDHHC13Q8IUH4 622 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 PHB2Q99623 299 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 GABARAPL3Q9BY60 117 aa11.13□□□□□ -0.63
HDAC6-224ENST00000481929 FAM223BA6NKX1 122 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 UBE2CO00762 179 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 APOA2P02652 100 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 ZNF45Q02386 682 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 PDPNQ86YL7 162 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 FAM223AQ8IWN6 122 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-224ENST00000481929 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
HDAC6-224ENST00000481929 LGALS12Q96DT0 336 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 CYYR1Q96J86 154 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 SELENOIQ9C0D9 397 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 BANF2Q9H503 90 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 ZNF230Q9UIE0 474 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-224ENST00000481929 EXOGQ9Y2C4 368 aaKnown RBP11.12□□□□□ -0.63
HDAC6-224ENST00000481929 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
HDAC6-224ENST00000481929 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.11□□□□□ -0.63
HDAC6-224ENST00000481929 PDCD6O75340 191 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
HDAC6-224ENST00000481929 BAG2O95816 211 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 IFNA4P05014 189 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 APELAP0DMC3 54 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 MGMTP16455 207 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 CAPGP40121 348 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 RHOGP84095 191 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 TM4SF20Q53R12 229 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 GLIPR1L1Q6UWM5 242 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
HDAC6-224ENST00000481929 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 MUL1Q969V5 352 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 RNF183Q96D59 192 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 KRTAP4-5Q9BYR2 181 aa11.11□□□□□ -0.63
HDAC6-224ENST00000481929 SNTNA6NMZ2 147 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 LGALS9O00182 355 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 CRTAPO75718 401 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-224ENST00000481929 OR9G9P0C7N8 305 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 CBLN1P23435 193 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 MAP2K4P45985 399 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 TCTAP57738 103 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 ATP6AP1Q15904 470 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 MEDAGQ5VYS4 303 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 SIGIRRQ6IA17 410 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 ORAI1Q96D31 301 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 Q96M66 194 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 AGMATQ9BSE5 352 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
HDAC6-224ENST00000481929 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms