RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TAMM41Q96BW9 452 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 IMMP1LQ96LU5 166 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 RDH12Q96NR8 316 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 PPP1R2P1Q96PQ5 205 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 GNB1LQ9BYB4 327 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ZNF696Q9H7X3 374 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 CMTM6Q9NX76 183 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 SS18L2Q9UHA2 77 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 ABCA2Q9BZC7 2435 aa2.42□□□□□ -2.02
SMC6-208ENST00000481708 EXOC1LA0A1B0GW35 172 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 STX10O60499 249 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 PIAS1O75925 651 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FSTL3O95633 263 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 HMGN1P05114 100 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ATP5G1P05496 136 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ACOT2P49753 483 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 PNOCQ13519 176 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 C16orf72Q14CZ0 275 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 IRF4Q15306 451 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 PAMR1Q6UXH9 720 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZIC4Q8N9L1 334 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OR2D3Q8NGH3 330 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OR1L8Q8NGR8 309 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZNRF2Q8NHG8 242 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 RDH5Q92781 318 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 Q96MT0 163 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 DCSTAMPQ9H295 470 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZSCAN16Q9H4T2 348 aaPredicted RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZNF702PQ9H963 129 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 CA10Q9NS85 328 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 RNF7Q9UBF6 113 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 HHLA2Q9UM44 414 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 SLC25A15Q9Y619 301 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 SNRNP200O75643 2136 aaKnown RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 CA2P00918 260 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 TNNC2P02585 160 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 AMBPP02760 352 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 CLPSP04118 112 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 HERPUD1Q15011 391 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 TRMT12Q53H54 448 aaKnown RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 SLC35E4Q6ICL7 350 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM183BPQ6ZVS7 135 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OLIG3Q7RTU3 272 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 NIT1Q86X76 327 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 WDSUB1Q8N9V3 476 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OR1N2Q8NGR9 330 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OR52N1Q8NH53 320 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 OR10D3Q8NH80 312 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM3DQ96BQ1 224 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 GMPPAQ96IJ6 420 aaPredicted RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 ANKRD36BP1Q96IX9 119 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 SUCNR1Q9BXA5 334 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM107BQ9H098 131 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ASF1AQ9Y294 204 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM236DA0A1B0GTK5 79 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 DYNC1I1O14576 645 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 GPR75O95800 540 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 CYB5R3P00387 301 aaPredicted RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM236CP0DP71 79 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 PRTN3P24158 256 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 RPL19P84098 196 aaKnown RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 PTGES3Q15185 160 aaKnown RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 CLEC12AQ5QGZ9 265 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FAM222AQ5U5X8 452 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 FBXL22Q6P050 247 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 SLC26A10Q8NG04 563 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZFAND1Q8TCF1 268 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 RASSF5Q8WWW0 418 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 KCNS1Q96KK3 526 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 PRSS27Q9BQR3 290 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 MRPS26Q9BYN8 205 aaKnown RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 MIXL1Q9H2W2 232 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 CENPHQ9H3R5 247 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 VPS29Q9UBQ0 182 aa2.41□□□□□ -2.02
SMC6-208ENST00000481708 ZNF629Q9UEG4 869 aaPredicted RBP2.41□□□□□ -2.02
SMC6-208ENST00000481708 CCDC168Q8NDH2 2452 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 SVILO95425 2214 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 IGHV3OR16-9A0A0B4J2B5 98 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 OR4C46A6NHA9 309 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 SRRM5B3KS81 715 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 ISLRO14498 428 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 SNRPCP09234 159 aaKnown RBP2.4□□□□□ -2.02
SMC6-208ENST00000481708 UCHL3P15374 230 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 RCC1P18754 421 aaPredicted RBP2.4□□□□□ -2.02
SMC6-208ENST00000481708 OR2B11Q5JQS5 317 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 AWAT2Q6E213 333 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 TEX43Q6ZNM6 134 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 C9orf47Q6ZRZ4 202 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 RASSF6Q6ZTQ3 369 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 MARCH3Q86UD3 253 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 OR51S1Q8NGJ8 323 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 IL22RA2Q969J5 263 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 PGLYRP2Q96PD5 576 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 METTL26Q96S19 204 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 FAAP24Q9BTP7 215 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 TXNIPQ9H3M7 391 aa2.4□□□□□ -2.02
SMC6-208ENST00000481708 SPANXB1Q9NS25 103 aaPredicted RBP2.4□□□□□ -2.02
SMC6-208ENST00000481708 ARMC1Q9NVT9 282 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms