RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 IGLV2-14P01704 120 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IGHV1-69P01742 117 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IGHV3-43DP0DP04 118 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IGKV1-13P0DP09 117 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 PGAM2P15259 253 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 HNF1AP20823 631 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 F2RP25116 425 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 DUTP33316 252 aaKnown RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 THBS3P49746 956 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 CCR6P51684 374 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 EIF4EBP1Q13541 118 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 GNMTQ14749 295 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 LTC4SQ16873 150 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 FAAP20Q6NZ36 180 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ZNF818PQ6ZRF7 136 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SGPP2Q8IWX5 399 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ODF3L1Q8IXM7 274 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 LYG1Q8N1E2 194 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 DRAM1Q8N682 238 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 OR5AN1Q8NGI8 311 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SECTM1Q8WVN6 248 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 RTN4IP1Q8WWV3 396 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 IL22RA2Q969J5 263 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 TOMM40LQ969M1 308 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ABHD14BQ96IU4 210 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ZNF251Q9BRH9 671 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 FXYD6Q9H0Q3 95 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 OR2D2Q9H210 308 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 PRDM13Q9H4Q3 707 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 GPN1Q9HCN4 374 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SIRT7Q9NRC8 400 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 CCL28Q9NRJ3 127 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
SYNE1-225ENST00000481502 NUDT15Q9NV35 164 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SDHAF2Q9NX18 166 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SHPKQ9UHJ6 478 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ITGB1BP2Q9UKP3 347 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 NUP50Q9UKX7 468 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 ABCA2Q9BZC7 2435 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.34
SYNE1-225ENST00000481502 SAA2-SAA4A0A096LPE2 208 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 DUXBA0A1W2PPF3 345 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CRYM-AS1A6NIL9 109 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 VGLL3A8MV65 326 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 A8MV72 311 aaPredicted RBP6.7□□□□□ -1.34
SYNE1-225ENST00000481502 NPFFO15130 113 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 PROP1O75360 226 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
SYNE1-225ENST00000481502 ARG1P05089 322 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 FGF2P09038 288 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 SAA2P0DJI9 122 aaPredicted RBP6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CD99P14209 185 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CD1BP29016 333 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 BRS3P32247 399 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 RAB13P51153 203 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 PIGPP57054 158 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 FXYD4P59646 89 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 TPTE2P1Q5T6R2 138 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 TGIF2LXQ8IUE1 241 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CIARTQ8N365 385 aaPredicted RBP6.7□□□□□ -1.34
SYNE1-225ENST00000481502 LRTM2Q8N967 370 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 UBALD1Q8TB05 177 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 LHX4Q969G2 390 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 RPEQ96AT9 228 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CACFD1Q9UGQ2 172 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 VSIG4Q9Y279 399 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 NAV3Q8IVL0 2385 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CR1P17927 2039 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 ARHGAP32A7KAX9 2087 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
SYNE1-225ENST00000481502 TEX13DA0A0J9YY54 714 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-225ENST00000481502 C3orf85A0A1B0GTC6 90 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 MEX3AA1L020 520 aaKnown RBP6.69□□□□□ -1.34
SYNE1-225ENST00000481502 H0Y980 276 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 HSD17B6O14756 317 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 ARPC1BO15143 372 aaKnown RBP6.69□□□□□ -1.34
SYNE1-225ENST00000481502 SLC31A2O15432 143 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 CDS2O95674 445 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 APOA2P02652 100 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 RLN1P04808 185 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 FBP1P09467 338 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 OR4E1P0C645 316 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 UCP1P25874 307 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 LGALS7P47929 136 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 GNG10P50151 68 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 CBX3Q13185 183 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 EBI3Q14213 229 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 GLDNQ6ZMI3 551 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-225ENST00000481502 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 LYG2Q86SG7 212 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 PDPNQ86YL7 162 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 OR8H1Q8NGG4 311 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 OSR1Q8TAX0 266 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-225ENST00000481502 MITD1Q8WV92 249 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 DDB2Q92466 427 aa6.69□□□□□ -1.34
SYNE1-225ENST00000481502 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms