RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 LOC105371242A0A075B767 164 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 C4orf51C9J302 202 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 C19orf48Q6RUI8 117 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 FAM24BQ8N5W8 94 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 OR4X1Q8NH49 305 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 DYRK2Q92630 601 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 TMEM204Q9BSN7 226 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 NPVFQ9HCQ7 196 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 CALYQ9NYX4 217 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 RALYQ9UKM9 306 aaKnown RBP8.16□□□□□ -1.1
GARNL3-216ENST00000481242 SPTBN1Q01082 2364 aaKnown RBP8.16□□□□□ -1.1
GARNL3-216ENST00000481242 MYOFQ9NZM1 2061 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 H0Y8G0 127 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 NTN1O95631 604 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 RECKO95980 971 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 IL11P20809 199 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 DYNLT3P51808 116 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 SERF2P84101 59 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 ATP1A1-AS1Q5TC04 95 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 FAM210BQ96KR6 192 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 PARD6GQ9BYG4 376 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-216ENST00000481242 WNT5BQ9H1J7 359 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 KLHDC2Q9Y2U9 406 aa8.16□□□□□ -1.1
GARNL3-216ENST00000481242 FAM74A7A6NL05 159 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 ZNF708P17019 499 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 USF1P22415 310 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-216ENST00000481242 RPS4XP62701 263 aaKnown RBP8.15□□□□□ -1.1
GARNL3-216ENST00000481242 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
GARNL3-216ENST00000481242 KHDC3LQ587J8 217 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 LAMTOR1Q6IAA8 161 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 RBPMS2Q6ZRY4 209 aaKnown RBP8.15□□□□□ -1.1
GARNL3-216ENST00000481242 NECAP1Q8NC96 275 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 LPAR5Q9H1C0 372 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 TNFRSF19Q9NS68 423 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 DOK5Q9P104 306 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 VSIG4Q9Y279 399 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 SLC25A53Q5H9E4 307 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 STARD4Q96DR4 205 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 CCL19Q99731 98 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 NDUFAF3Q9BU61 184 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 C5orf52A6NGY3 159 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 HYPMO75409 117 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 EFEMP2O95967 443 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 AMTP48728 403 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 LOXL3P58215 753 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 UBE2V2Q15819 145 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 PLAC9Q5JTB6 97 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 SLC35E3Q7Z769 313 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 OR4A5Q8NH83 315 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 CLEC7AQ9BXN2 247 aa8.15□□□□□ -1.1
GARNL3-216ENST00000481242 AKAP6Q13023 2319 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 CKAP5Q14008 2032 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 TRBV5-7A0A0A0MS05 114 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 CTXND1A0A1B0GTU2 59 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 UBE2CO00762 179 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 ZNF385CQ66K41 422 aaPredicted RBP8.15□□□□□ -1.11
GARNL3-216ENST00000481242 C11orf42Q8N5U0 333 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 ZNF645Q8N7E2 425 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.11
GARNL3-216ENST00000481242 FAM206AQ9NX38 181 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 DLL3Q9NYJ7 618 aa8.15□□□□□ -1.11
GARNL3-216ENST00000481242 CACNA1HO95180 2353 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 NTN3O00634 580 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PDE6DO43924 150 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 TMEM50BP56557 158 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 FAM106AQ4KMX7 169 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 MRPL24Q96A35 216 aaKnown RBP8.14□□□□□ -1.11
GARNL3-216ENST00000481242 NRIP2Q9BQI9 281 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PTPRFP10586 1907 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 CXorf1O96002 111 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 HPXP02790 462 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 FOLR2P14207 255 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 CXCL3P19876 107 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 G6PCP35575 357 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PSG5Q15238 335 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 TOMM20LQ6UXN7 152 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PUSL1Q8N0Z8 303 aaKnown RBP8.14□□□□□ -1.11
GARNL3-216ENST00000481242 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 HIGD1AQ9Y241 93 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 CCDC88CQ9P219 2028 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 WNT9BO14905 357 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 OR2A4O95047 310 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 HLA-DQB1P01920 261 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 PSG2P11465 335 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 RIGQ13278 110 aa8.14□□□□□ -1.11
GARNL3-216ENST00000481242 FADS6Q8N9I5 356 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms