RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 BATF3Q9NR55 127 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 ZNF107Q9UII5 783 aaPredicted RBP15.8■□□□□ 0.12
LIME1-205ENST00000480139 RNF150Q9ULK6 438 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 RBM7Q9Y580 266 aaKnown RBP15.8■□□□□ 0.12
LIME1-205ENST00000480139 FABP12A6NFH5 140 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 OR5H14A6NHG9 310 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 PROP1O75360 226 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 RBBP9O75884 186 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 IGKV1D-33P01593 117 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 IGKV1-33P01594 117 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 FCGR2CP31995 323 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 RELBQ01201 579 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 ACTBL2Q562R1 376 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 OR2T10Q8NGZ9 312 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 MDFIQ99750 246 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 NPFFR1Q9GZQ6 430 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 EHFQ9NZC4 300 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 KLK11Q9UBX7 282 aa15.79■□□□□ 0.12
LIME1-205ENST00000480139 IGHV3-72A0A0B4J1Y9 119 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 M0QZK8 103 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 GSTZ1O43708 216 aaPredicted RBP15.78■□□□□ 0.12
LIME1-205ENST00000480139 TSPAN9O75954 239 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 CT45A6P0DMU7 189 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 CT45A5P0DMU8 189 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 CT45A7P0DMV0 189 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 TMEM11P17152 192 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 TBPP20226 339 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 PTBP1P26599 531 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIME1-205ENST00000480139 HRH1P35367 487 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 COMPP49747 757 aaPredicted RBP15.78■□□□□ 0.12
LIME1-205ENST00000480139 RAG2P55895 527 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 DGCR2P98153 550 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 FOXL1Q12952 345 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 HES1Q14469 280 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 MSMO1Q15800 293 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 FBLN7Q53RD9 439 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 ZNF660Q6AZW8 331 aaPredicted RBP15.78■□□□□ 0.12
LIME1-205ENST00000480139 DHRS11Q6UWP2 260 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 CCDC190Q86UF4 302 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 Q8N6K4 173 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 ZNF645Q8N7E2 425 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 OR5AN1Q8NGI8 311 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 OR4F5Q8NH21 305 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 EAF1Q96JC9 268 aaPredicted RBP15.78■□□□□ 0.12
LIME1-205ENST00000480139 SLC25A33Q9BSK2 321 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 SDHAF2Q9NX18 166 aa15.78■□□□□ 0.12
LIME1-205ENST00000480139 RBMX2Q9Y388 322 aaKnown RBP15.78■□□□□ 0.12
LIME1-205ENST00000480139 MOSP00540 346 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 PPYP01298 95 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 AADACP22760 399 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 HLA-DMAP28067 261 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 MC5RP33032 325 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 ETV6P41212 452 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 RFX2P48378 723 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 RNASE12Q5GAN4 147 aaKnown RBP15.77■□□□□ 0.12
LIME1-205ENST00000480139 VAX1Q5SQQ9 334 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 FAM131AQ6UXB0 335 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 OR8H1Q8NGG4 311 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 OR6Q1Q8NGQ2 317 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 C16orf95Q9H693 158 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 MMP24Q9Y5R2 645 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 V9GYH0 126 aa15.77■□□□□ 0.12
LIME1-205ENST00000480139 IGKV1D-13A0A0B4J2D9 117 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 A0A1B0GUS0 222 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 ZNF736B4DX44 427 aaPredicted RBP15.76■□□□□ 0.11
LIME1-205ENST00000480139 H0YJW9 148 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 PMP2P02689 132 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 IGKV1-13P0DP09 117 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 Q6ZSV7 163 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 TMEM229BQ8NBD8 167 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 OR4C13Q8NGP0 309 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 C5orf30Q96GV9 206 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 MOB4Q9Y3A3 225 aa15.76■□□□□ 0.11
LIME1-205ENST00000480139 M0R1X1 148 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 FGF16O43320 207 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 IGLV2-14P01704 120 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 TAGLNQ01995 201 aaKnown RBP15.75■□□□□ 0.11
LIME1-205ENST00000480139 SPANXN2Q5MJ10 180 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 Q8N2B8 174 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 ADTRPQ96IZ2 230 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 TAS2R8Q9NYW2 309 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 WASHC3Q9Y3C0 194 aa15.75■□□□□ 0.11
LIME1-205ENST00000480139 CD74P04233 296 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 CSF1P09603 554 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 THBS3P49746 956 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 TAS2R19P59542 299 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 ZNF383Q8NA42 475 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 OR6F1Q8NGZ6 308 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 BORCS5Q969J3 196 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 MOB3AQ96BX8 217 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 ZNF2Q9BSG1 426 aaPredicted RBP15.74■□□□□ 0.11
LIME1-205ENST00000480139 BEX1Q9HBH7 125 aa15.74■□□□□ 0.11
LIME1-205ENST00000480139 APOA2P02652 100 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 CD3DP04234 171 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 AMY1AP04745 511 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 AMY2AP04746 511 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 DUTP33316 252 aaKnown RBP15.73■□□□□ 0.11
LIME1-205ENST00000480139 HERV-K104P61576 105 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 HNF4GQ14541 408 aa15.73■□□□□ 0.11
LIME1-205ENST00000480139 ZNF79Q15937 498 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms