RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 NGBQ9NPG2 151 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 SDHAF2Q9NX18 166 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 CISD1Q9NZ45 108 aaKnown RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 CACNG5Q9UF02 275 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NDRG3Q9UGV2 375 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NSG2Q9Y328 171 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 RFNGQ9Y644 331 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 CUBNO60494 3623 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 UBR5O95071 2799 aaPredicted RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 MED19A0JLT2 244 aaPredicted RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 WRBO00258 174 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 SIGLEC5O15389 551 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 MMP23AO75900 390 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 LY6HO94772 140 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 CLDN1O95832 211 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 FAM157CP0CG43 387 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 IRF2P14316 349 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NDUFB7P17568 137 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 TNFRSF1AP19438 455 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NFYBP25208 207 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 G6PCP35575 357 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 FHITP49789 147 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 ARHGDIBP52566 201 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 LOXL3P58215 753 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 UBA52P62987 128 aaKnown RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 ADORA2A-AS1P86434 159 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 ZNF816Q0VGE8 651 aaPredicted RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 TUSC1Q2TAM9 212 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 MST1LQ2TV78 715 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 Q3ZCU0 254 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 MORN2Q502X0 79 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 RPL39P5Q59GN2 51 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 TOR2AQ5JU69 321 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NCR3LG1Q68D85 454 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 STUMQ69YW2 141 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 THOC7Q6I9Y2 204 aaKnown RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 C1orf229Q6ZS94 237 aaPredicted RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 SPAG16Q8N0X2 631 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 OR2C3Q8N628 320 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 ZNF645Q8N7E2 425 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 HSD17B11Q8NBQ5 300 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 ST6GALNAC3Q8NDV1 305 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 OR10Z1Q8NGY1 313 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 AKR1E2Q96JD6 320 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 REG4Q9BYZ8 158 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 WFDC1Q9HC57 220 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 TAS2R3Q9NYW6 316 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 ZNRD1Q9P1U0 126 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 RNF115Q9Y4L5 304 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 AUP1Q9Y679 476 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 POMT1Q9Y6A1 747 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 TEX15Q9BXT5 2789 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 NF1P21359 2839 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 SONP18583 2426 aaKnown RBP3.42□□□□□ -1.86
USP25-208ENST00000478932 FBN2P35556 2912 aa3.42□□□□□ -1.86
USP25-208ENST00000478932 MFSD2BA6NFX1 497 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 LRRC30A6NM36 301 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 ZNF705EA8MWA4 302 aaPredicted RBP3.41□□□□□ -1.86
USP25-208ENST00000478932 KIAA1324LA8MWY0 1029 aaPredicted RBP3.41□□□□□ -1.86
USP25-208ENST00000478932 FCN3O75636 299 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 SCO1O75880 301 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 C1QL1O75973 258 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 JTBO76095 146 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 CD3EP07766 207 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 LPAR6P43657 344 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 AANATQ16613 207 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 LINC01559Q495D7 138 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 NCMAPQ5T1S8 102 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 LYPD2Q6UXB3 125 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 ZNF788Q6ZQV5 615 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 VKORC1L1Q8N0U8 176 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 STPG2Q8N412 459 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 ZNF561Q8N587 486 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 TMEM252Q8N6L7 170 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 OR1S2Q8NGQ3 325 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 PPP1R35Q8TAP8 253 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 STOML3Q8TAV4 291 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 PHYHIPLQ96FC7 376 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 SDSLQ96GA7 329 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 SH3BGRL3Q9H299 93 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 HRH4Q9H3N8 390 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 MS4A5Q9H3V2 200 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 PLEKHA2Q9HB19 425 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
USP25-208ENST00000478932 DYNLRB1Q9NP97 96 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 TENM4Q6N022 2769 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 KBTBD11-OT1A0A1B0GTJ5 212 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 IGSF23A1L1A6 192 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 VSTM5A8MXK1 200 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 AGPAT2O15120 278 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 SLC31A2O15432 143 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 ZG16O60844 167 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 PITX3O75364 302 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
USP25-208ENST00000478932 S1PR2O95136 353 aa3.41□□□□□ -1.86
USP25-208ENST00000478932 F12P00748 615 aaPredicted RBP3.41□□□□□ -1.86
USP25-208ENST00000478932 ADH4P08319 380 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms