RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 STUB1Q9UNE7 303 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 ARPC1BO15143 372 aaKnown RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 NAPSAO96009 420 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 APOA2P02652 100 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 ZBTB25P24278 435 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 CEACAM6P40199 344 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 UNC119Q13432 240 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 ZFAND6Q6FIF0 208 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 ZNF880Q6PDB4 577 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 MS4A15Q8N5U1 240 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 DRAXINQ8NBI3 349 aaPredicted RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 ISOC1Q96CN7 298 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 RNF5Q99942 180 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 RIMS4Q9H426 269 aaPredicted RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 PSORS1C1Q9UIG5 152 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 ZNF221Q9UK13 617 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 MGAT4AQ9UM21 535 aa10.19□□□□□ -0.78
VCL-205ENST00000478896 HUWE1Q7Z6Z7 4374 aaKnown RBP10.19□□□□□ -0.78
VCL-205ENST00000478896 C13orf42A0A1B0GVH6 325 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 ITGB1BP1O14713 200 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 LDLRAD4O15165 306 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 SPDEFO95238 335 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 ZP3P21754 424 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 FXYD3Q14802 87 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 PSG5Q15238 335 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 HSD17B12Q53GQ0 312 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 C1orf100Q5SVJ3 147 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 ZNF562Q6V9R5 426 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 LRRTM1Q86UE6 522 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 PDPNQ86YL7 162 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 PACRGLQ8N7B6 248 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 NANOGP1Q8N7R0 232 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 PHYHIPQ92561 330 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 RHOVQ96L33 236 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 HDHD3Q9BSH5 251 aaPredicted RBP10.18□□□□□ -0.78
VCL-205ENST00000478896 URM1Q9BTM9 101 aaKnown RBP10.18□□□□□ -0.78
VCL-205ENST00000478896 MND1Q9BWT6 205 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 C11orf54Q9H0W9 315 aaPredicted RBP10.18□□□□□ -0.78
VCL-205ENST00000478896 RANGRFQ9HD47 186 aaPredicted RBP10.18□□□□□ -0.78
VCL-205ENST00000478896 AK3Q9UIJ7 227 aa10.18□□□□□ -0.78
VCL-205ENST00000478896 TMEM14DPA8MWL7 114 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 SLC25A17O43808 307 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 CNIH1O95406 144 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 BPNT1O95861 308 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 IGKV1-16P04430 117 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 GNAO1P09471 354 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 ARSBP15848 533 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 POC5Q8NA72 575 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 OR6M1Q8NGM8 313 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 TM2D3Q9BRN9 247 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 AGMATQ9BSE5 352 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 PLGRKTQ9HBL7 147 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 C12orf4Q9NQ89 552 aa10.17□□□□□ -0.78
VCL-205ENST00000478896 GAR1Q9NY12 217 aaKnown RBP10.17□□□□□ -0.78
VCL-205ENST00000478896 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 TRBV6-6A0A0A6YYG2 114 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 ANKRD34BA5PLL1 514 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 H3BUA1 57 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 EBAG9O00559 213 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 SOCS1O15524 211 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 SCTP09683 121 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 SRMP19623 302 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 LAIR2Q6ISS4 152 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 OR5T1Q8NG75 326 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 PLCXD1Q9NUJ7 323 aa10.16□□□□□ -0.78
VCL-205ENST00000478896 LCE6AA0A183 80 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 M0R1X1 148 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 SNRPBP14678 240 aaKnown RBP10.15□□□□□ -0.78
VCL-205ENST00000478896 MRPS15P82914 257 aaKnown RBP10.15□□□□□ -0.78
VCL-205ENST00000478896 QRFPP83859 136 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 CBX3Q13185 183 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 RCN1Q15293 331 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 P2RY14Q15391 338 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 MED22Q15528 200 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 GTSCR1Q86UQ5 136 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 CMSS1Q9BQ75 279 aaKnown RBP10.15□□□□□ -0.78
VCL-205ENST00000478896 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 Q9N2K0 584 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 RDH8Q9NYR8 311 aa10.15□□□□□ -0.78
VCL-205ENST00000478896 H0Y980 276 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 CDK1P06493 297 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 VEGFCP49767 419 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 LINC00205P59089 165 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 DEFA5Q01523 94 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 SPHARQ15513 63 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 MOGAT2Q3SYC2 334 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 Q8N1Y9 231 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms