RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CDK10Q15131 360 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 ATP6V1FQ16864 119 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 KRTAP20-2Q3LI61 65 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 HENMT1Q5T8I9 393 aaKnown RBP-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 Q8N814 137 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 YIPF7Q8N8F6 280 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 OR51Q1Q8NH59 317 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 NELFBQ8WX92 580 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 BIRC8Q96P09 236 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 SUCNR1Q9BXA5 334 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 SLC2A9Q9NRM0 540 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 CISHQ9NSE2 258 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 KIF24Q5T7B8 1368 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 RAB3GAP2Q9H2M9 1393 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 PTPN13Q12923 2485 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 RYR3Q15413 4870 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 BSNQ9UPA5 3926 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 DICER1Q9UPY3 1922 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 CHD5Q8TDI0 1954 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 RP1P56715 2156 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 MEIS3P1A6NDR6 274 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 TRIM64CA6NLI5 447 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 SEC14L6B5MCN3 397 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 BOLA2-SMG1P6H3BVE0 249 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 MPZL2O60487 215 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 FBP1P09467 338 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 RPS5P46782 204 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 STC1P52823 247 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 EMP1P54849 157 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 RBM11P57052 281 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 LCN2P80188 198 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM19A1Q7Z5A9 133 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 MTERF4Q7Z6M4 381 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 VAT1Q99536 393 aa-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 RBM7Q9Y580 266 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 SETXQ7Z333 2677 aaKnown RBP-0.76□□□□□ -2.53
NCKAP1-204ENST00000477988 LRP1BQ9NZR2 4599 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CEP192Q8TEP8 1941 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 ATAD2BQ9ULI0 1458 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TRAV7A0A075B6U4 112 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TVP23AA6NH52 213 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 GOLGA6L10A6NI86 522 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TMEM212A6NML5 194 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CENPXA8MT69 81 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 H3BSA7 217 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF593O00488 134 aaPredicted RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 INE1O15225 51 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 KLRC4O43908 158 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CDK14O94921 469 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 NDUFB2O95178 105 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 LGALS1P09382 135 aaKnown RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CD7P09564 240 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CDK2P24941 298 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CD79BP40259 229 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TAS2R30P59541 319 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TAS2R60P59551 318 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TPI1P60174 286 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 SPAG1Q07617 926 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 BAXQ07812 192 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 XRCC4Q13426 336 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM162BQ5T6X4 162 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 KRTAP26-1Q6PEX3 210 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 C10orf99Q6UWK7 81 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 LINC00575Q6W349 94 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 SCGB1D4Q6XE38 83 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF705AQ6ZN79 300 aaPredicted RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 Q6ZS92 163 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 ZBTB8OSQ8IWT0 167 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 OFCC1Q8IZS5 231 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TMEM86AQ8N2M4 240 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CCDC148Q8NFR7 591 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 OR5D18Q8NGL1 313 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 TSEN15Q8WW01 171 aaKnown RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 SLC7A6Q92536 515 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 NAT6Q93015 286 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF396Q96N95 335 aaPredicted RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 PRSS27Q9BQR3 290 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 MED18Q9BUE0 208 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 CHID1Q9BWS9 393 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 EIF5A2Q9GZV4 153 aaKnown RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 NT5C3AQ9H0P0 336 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 GTSF1LQ9H1H1 148 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 EXTL2Q9UBQ6 330 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 RRP15Q9Y3B9 282 aaKnown RBP-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 F8P00451 2351 aa-0.77□□□□□ -2.53
NCKAP1-204ENST00000477988 H7C2G1 150 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 TXNDC9O14530 226 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 RFXANKO14593 260 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ITGB1BP1O14713 200 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 UBE2L6O14933 153 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SPINK1P00995 79 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 CPN2P22792 545 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 PSMB8P28062 276 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 CA5AP35218 305 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF93P35789 620 aaPredicted RBP-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 CSKP41240 450 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 SULT1A2P50226 295 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 DAPP51397 102 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF137PP52743 207 aa-0.78□□□□□ -2.53
NCKAP1-204ENST00000477988 PSMD4P55036 377 aaKnown RBP-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms