RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 MRGPRDQ8TDS7 321 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 MUCL1Q96DR8 90 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 MEGF10Q96KG7 1140 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 YPEL2Q96QA6 119 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 RAB9BQ9NP90 201 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
PTPRF-212ENST00000477970 RBFOX3A6NFN3 312 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 BRWD1-AS2P59051 145 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 RPL30P62888 115 aaKnown RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 TMEM88Q6PEY1 159 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 TMEM217Q8N7C4 229 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 FZR1Q9UM11 496 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 PRELID3BQ9Y3B1 194 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 LRRC30A6NM36 301 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 HSPB1P04792 205 aaKnown RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 EGR1P18146 543 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 HAPLN4Q86UW8 402 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 GCSAMQ8N6F7 178 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 NUP37Q8NFH4 326 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 KCNJ16Q9NPI9 418 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 UFSP2Q9NUQ7 469 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 ATP6V1G2-DDX39BF2Z307 99 aa10.18□□□□□ -0.78
PTPRF-212ENST00000477970 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 KLF2Q9Y5W3 355 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-212ENST00000477970 ODAMA1E959 279 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 COLCA2A8K830 154 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 M0R1B8 84 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.788e-7■□□□□ 9.9
PTPRF-212ENST00000477970 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 ZNF83P51522 516 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 TMEM267Q0VDI3 215 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 TMEM30BQ3MIR4 351 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 Q8TCH9 128 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 SCGB1C1Q8TD33 95 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 PINX1Q96BK5 328 aaKnown RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 RBKSQ9H477 322 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 IGHV3-64DA0A0J9YX35 117 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 NXPH3O95157 252 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 CLDN1O95832 211 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 RNF212Q495C1 297 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 WDR61Q9GZS3 305 aaKnown RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 EPG5Q9HCE0 2579 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 A8MXE2 369 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 NDUFA2O43678 99 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 RAMP3O60896 148 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 CGB3P0DN86 165 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 CGB7P0DN87 165 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 NFYBP25208 207 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 SSTR5P35346 364 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 MAS1LP35410 378 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 ARL16Q0P5N6 197 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 VWC2Q2TAL6 325 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 KHDC3LQ587J8 217 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 LRP11Q86VZ4 500 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 UBALD1Q8TB05 177 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 C14orf79Q96F83 325 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 BBC3Q96PG8 261 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-212ENST00000477970 ABHD14AQ9BUJ0 271 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 ELOVL5Q9NYP7 299 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 IL19Q9UHD0 177 aa10.17□□□□□ -0.78
PTPRF-212ENST00000477970 RUNX1Q01196 453 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 MRGPRGQ86SM5 289 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 ZNF561Q8N587 486 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 CLDND2Q8NHS1 167 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 TCTEX1D2Q8WW35 142 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 OR2V2Q96R30 315 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 ZZEF1O43149 2961 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 C17orf98A8MV24 154 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 S1PR2O95136 353 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 IAPPP10997 89 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 KIR2DS2P43631 304 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 MORN2Q502X0 79 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 AWAT1Q58HT5 328 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 FAM180AQ6UWF9 173 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 THNSL2Q86YJ6 484 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 SDSLQ96GA7 329 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 OR6C3Q9NZP0 311 aa10.16□□□□□ -0.78
PTPRF-212ENST00000477970 PMS2P5A8MQ11 134 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
PTPRF-212ENST00000477970 TDGF1P3P51864 188 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 CCL20P78556 96 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 AVPI1Q5T686 147 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-212ENST00000477970 FAM234AQ9H0X4 552 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 LINC00574Q9H8X3 128 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 FBXO7Q9Y3I1 522 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 RFNGQ9Y644 331 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 MEX3AA1L020 520 aaKnown RBP10.15□□□□□ -0.78
PTPRF-212ENST00000477970 MKRN2OSH3BPM6 223 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 GPR37O15354 613 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 LOXL3P58215 753 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 ICAM4Q14773 271 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
PTPRF-212ENST00000477970 RPRMLQ8N4K4 120 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms