RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ERGIC3Q9Y282 383 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 HEY1Q9Y5J3 304 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 MINOS1-NBL1R4GNA1 71 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 AK9Q5TCS8 1911 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ICE1Q9Y2F5 2266 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 COL11A1P12107 1806 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 FNDC10F2Z333 226 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 CRXO43186 299 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 S1PR2O95136 353 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PSMG1O95456 288 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 DHFRP00374 187 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 TCRBP04435 133 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 RPS17P08708 135 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 NQO1P15559 274 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 CD36P16671 472 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 SERPINB1P30740 379 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PPP1CCP36873 323 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 AKR1C2P52895 323 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 OR10A3P58181 314 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 RAB4BP61018 213 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 RANP62826 216 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 MRPS25P82663 173 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 SKP2Q13309 424 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 HES1Q14469 280 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PAFAH1B3Q15102 231 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PDGFRLQ15198 375 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 TAF1AQ15573 450 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 GUK1Q16774 197 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 HENMT1Q5T8I9 393 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 SDIM1Q6ZPB5 146 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 Q6ZS52 159 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 LYG2Q86SG7 212 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 ZBTB8OSQ8IWT0 167 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 MUC15Q8N387 334 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 OR5B17Q8NGF7 314 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 ZNRF2Q8NHG8 242 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 RNASEH2CQ8TDP1 164 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PTH2Q96A98 100 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 DGCR14Q96DF8 476 aaKnown RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 CMTM5Q96DZ9 223 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 DNAJC30Q96LL9 226 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 NIPSNAP1Q9BPW8 284 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 C6orf62Q9GZU0 229 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 METTL17Q9H7H0 456 aaPredicted RBP1.17□□□□□ -2.22
TARDBP-208ENST00000477447 C1orf109Q9NX04 203 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 BABAM2Q9NXR7 383 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 SMPXQ9UHP9 88 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 PSORS1C2Q9UIG4 136 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 GINS2Q9Y248 185 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 V9GYQ6 96 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 KIAA0232Q92628 1395 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 SHANK3Q9BYB0 1731 aa1.17□□□□□ -2.22
TARDBP-208ENST00000477447 ADGRB3O60242 1522 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 ARAP3Q8WWN8 1544 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 YLPM1P49750 1951 aaKnown RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 A0A1B0GX12 115 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 GNG14A0A1W2PPG7 69 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 VPS37CA5D8V6 355 aaPredicted RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 SMIM23A6NLE4 172 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 EFCAB9A8MZ26 197 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 C9J4A7 227 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 ACOX3O15254 700 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 SLC16A4O15374 487 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 TGOLN2O43493 480 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 ATP8B1O43520 1251 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 FADS1O60427 444 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 STX10O60499 249 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 TNFAIP8O95379 198 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 TNNC2P02585 160 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 ORM1P02763 201 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 CRHP06850 196 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 FBP1P09467 338 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 NBEAP1P0C6P0 100 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 OCM2P0CE71 109 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 C8orf88P0DMB2 117 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 RCVRNP35243 200 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 CD79BP40259 229 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 LPAR6P43657 344 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 SULT1A2P50226 295 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 RAP1GDS1P52306 607 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 ZNF117Q03924 483 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 RAB31Q13636 194 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 CCDC153Q494R4 210 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 RBM48Q5RL73 367 aaKnown RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 C3orf33Q6P1S2 294 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 DNM1P34Q6PK57 102 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 DRAM2Q6UX65 266 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 PHF13Q86YI8 300 aaPredicted RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 DOLPP1Q86YN1 238 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 Q8N402 240 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 TMEM251Q8N6I4 163 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 LFNGQ8NES3 379 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 OR1M1Q8NGA1 313 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 OR2D3Q8NGH3 330 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 OR5AK3PQ8NH89 298 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 OR10J5Q8NHC4 309 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 DYNC2LI1Q8TCX1 351 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 NEK7Q8TDX7 302 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms