RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PRR19A6NJB7 356 aa16.06■□□□□ 0.16
VARS2-209ENST00000477288 TMEM262E9PQX1 116 aa16.06■□□□□ 0.16
VARS2-209ENST00000477288 LGALS3P17931 250 aaKnown RBP16.06■□□□□ 0.16
VARS2-209ENST00000477288 FAM27BQ5VT28 67 aa16.06■□□□□ 0.16
VARS2-209ENST00000477288 A0A0B4J293 547 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 ATP1A1-AS1Q5TC04 95 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 OR52M1Q8NGK5 317 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 CENPVL1A0A0U1RR11 272 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 A8MWL6 223 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 OR2H2O95918 312 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 ZDHHC8Q9ULC8 765 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 KLHDC2Q9Y2U9 406 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 PGPA6NDG6 321 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 NDUFB4O95168 129 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 CX3CL1P78423 397 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 OPN4Q9UHM6 478 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 RNF115Q9Y4L5 304 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 IBA57Q5T440 356 aaKnown RBP16.05■□□□□ 0.16
VARS2-209ENST00000477288 KLK15Q9H2R5 256 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 MIXL1Q9H2W2 232 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 TMEM229AB2RXF0 380 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 FAM74A4Q5TZK3 123 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 PITPNC1Q9UKF7 332 aa16.05■□□□□ 0.16
VARS2-209ENST00000477288 MPV17P39210 176 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 DLX6P56179 175 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 CD300CQ08708 224 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 STPG3Q8N7X2 389 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 SP7Q8TDD2 431 aaPredicted RBP16.04■□□□□ 0.16
VARS2-209ENST00000477288 MMP16P51512 607 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 MRPL13Q9BYD1 178 aaKnown RBP16.04■□□□□ 0.16
VARS2-209ENST00000477288 DLL1O00548 723 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 IGKV3-20P01619 116 aa16.04■□□□□ 0.16
VARS2-209ENST00000477288 F12P00748 615 aaPredicted RBP16.03■□□□□ 0.16
VARS2-209ENST00000477288 ANOS1P23352 680 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 ARF6P62330 175 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
VARS2-209ENST00000477288 CENPVQ7Z7K6 275 aaPredicted RBP16.03■□□□□ 0.16
VARS2-209ENST00000477288 HIST1H4GQ99525 98 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 PPIAL4CA0A0B4J2A2 164 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 PPIAL4GP0DN37 164 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 ZP4Q12836 540 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 FAM106AQ4KMX7 169 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 THY1P04216 161 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 REG1AP05451 166 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 PDLIM4P50479 330 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 C9orf62Q8N4C0 152 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 ZNF645Q8N7E2 425 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 ZCCHC14Q8WYQ9 949 aaKnown RBP16.03■□□□□ 0.16
VARS2-209ENST00000477288 WNT2BQ93097 391 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 RBKSQ9H477 322 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
VARS2-209ENST00000477288 TLNRD1Q9H1K6 362 aa16.03■□□□□ 0.16
VARS2-209ENST00000477288 PKIAP61925 76 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 UBE2V2Q15819 145 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 HSPB9Q9BQS6 159 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 CDC42EP3Q9UKI2 254 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.16
VARS2-209ENST00000477288 ATP5G2Q06055 141 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 CYB561D1Q8N8Q1 229 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 OR13C6PQ8NH95 151 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 LSM10Q969L4 123 aaKnown RBP16.02■□□□□ 0.16
VARS2-209ENST00000477288 SCTP09683 121 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 FGF12P61328 243 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 RPL8P62917 257 aaKnown RBP16.02■□□□□ 0.16
VARS2-209ENST00000477288 ZNF56Q15929 161 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 PCSK4Q6UW60 755 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 NEU1Q99519 415 aa16.02■□□□□ 0.16
VARS2-209ENST00000477288 ZNF107Q9UII5 783 aaPredicted RBP16.02■□□□□ 0.16
VARS2-209ENST00000477288 HINT1P49773 126 aaPredicted RBP16.02■□□□□ 0.15
VARS2-209ENST00000477288 IDI2-AS1Q9NZ38 188 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 LOC105371242A0A075B767 164 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 A1L4Q6 167 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 SEC11BP0C7V7 166 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 CDCP2Q5VXM1 449 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.15
VARS2-209ENST00000477288 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 RBFOX2O43251 390 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■■□ 23.3
VARS2-209ENST00000477288 GPX1P07203 203 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 BCL2P10415 239 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 RND2P52198 227 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 SPATA45Q537H7 98 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 H3BTX0 84 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 STPG2Q8N412 459 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 SLC25A45Q8N413 288 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 MIOXQ9UGB7 285 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 SLC25A17O43808 307 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 EMP1P54849 157 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 FAM3BP58499 235 aaPredicted RBP16.01■□□□□ 0.15
VARS2-209ENST00000477288 KLRB1Q12918 225 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 LEAP2Q969E1 77 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 GPR82Q96P67 336 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 POLR2AP24928 1970 aaKnown RBP16.01■□□□□ 0.15
VARS2-209ENST00000477288 FGF5P12034 268 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 MFAP4P55083 255 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 MAP1LC3AQ9H492 121 aa16.01■□□□□ 0.15
VARS2-209ENST00000477288 F11RQ9Y624 299 aaKnown RBP16.01■□□□□ 0.15
VARS2-209ENST00000477288 MESP2Q0VG99 397 aa16■□□□□ 0.15
VARS2-209ENST00000477288 COL5A1-AS1Q5SY13 56 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms