RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LIFP15018 202 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 OR10J1P30954 320 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 FAM27BQ5VT28 67 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 GJC3Q8NFK1 279 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 MIEN1Q9BRT3 115 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 ANGPTL4Q9BY76 406 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 TMEM242Q9NWH2 141 aa7.13□□□□□ -1.27
VAPB-205ENST00000476395 IGHV1-45A0A0A0MS14 117 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 DHHO43323 396 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 YPEL1O60688 119 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ZFAND5O76080 213 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 COX6A1P12074 109 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 PRSS57Q6UWY2 283 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 MOB3AQ96BX8 217 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 C10orf35Q96D05 121 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 SIGLEC12Q96PQ1 595 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ERRFI1Q9UJM3 462 aaPredicted RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 SELENOKQ9Y6D0 94 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 LAMA5O15230 3695 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 SDK2Q58EX2 2172 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 IGKV1-6A0A0C4DH72 117 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 A0A0G2JRQ6 117 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 hCG_38984A0A1B0GV85 526 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 KIAA1324LA8MWY0 1029 aaPredicted RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 C1QTNF9BB2RNN3 333 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 G3V3Y1 287 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 GNRHRP30968 328 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 NPBWR2P48146 333 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ARL16Q0P5N6 197 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 BSXQ3C1V8 233 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 FAM78BQ5VT40 261 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 SPEM1Q8N4L4 309 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 OR5L2Q8NGL0 311 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 Q9N2K0 584 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 MANBALQ9NQG1 85 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 LYRM2Q9NU23 88 aaPredicted RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 C20orf202A1L168 122 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ZNF732B4DXR9 585 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 TNFSF11O14788 317 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 SPINK2P20155 84 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 AADACP22760 399 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 IL3RAP26951 378 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 RPL19P84098 196 aaKnown RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 UBALD2Q8IYN6 164 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ST6GALNAC3Q8NDV1 305 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 OR2D3Q8NGH3 330 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 MAFAQ8NHW3 353 aaPredicted RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 RBMXL1Q96E39 390 aaKnown RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 CIB3Q96Q77 187 aaPredicted RBP7.12□□□□□ -1.27
VAPB-205ENST00000476395 HSPB9Q9BQS6 159 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 OR6C3Q9NZP0 311 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 MSRB2Q9Y3D2 182 aa7.12□□□□□ -1.27
VAPB-205ENST00000476395 ZNF503-AS2A6NEH8 195 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 SH2D1BO14796 132 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 CDS2O95674 445 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 PAX9P55771 341 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 MTCP1P56278 107 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 OR1K1Q8NGR3 316 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 ABHD17AQ96GS6 310 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 ACY3Q96HD9 319 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 SLC35E1Q96K37 410 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 FAM103A1Q9BTL3 118 aaKnown RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 PLEKHF2Q9H8W4 249 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 PATZ1Q9HBE1 687 aaKnown RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 CISD1Q9NZ45 108 aaKnown RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 IGKV1D-13A0A0B4J2D9 117 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 OR5G3P0C626 314 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 IGKV1-13P0DP09 117 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 RPS16P62249 146 aaKnown RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
VAPB-205ENST00000476395 FER1L6-AS2Q96M78 137 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 PARLQ9H300 379 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 PLK3Q9H4B4 646 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 IL36GQ9NZH8 169 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 IL36RNQ9UBH0 155 aa7.11□□□□□ -1.27
VAPB-205ENST00000476395 TNFSF13O75888 250 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 IAPPP10997 89 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ADMP35318 185 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ECI1P42126 302 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 PSG4Q00888 419 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 Q0VFX4 171 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 OR8B8Q15620 311 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ATP6V1FQ16864 119 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TBL2Q9Y4P3 447 aaKnown RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 FREM1Q5H8C1 2179 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 DSPP15924 2871 aaKnown RBP7.1□□□□□ -1.27
VAPB-205ENST00000476395 HRASP01112 189 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 IGLV2-14P01704 120 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 RFPL3SP0C7P2 107 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 TDGF1P13385 188 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 CCKARP32238 428 aa7.1□□□□□ -1.27
VAPB-205ENST00000476395 CXCL12P48061 93 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms