RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RBBP9O75884 186 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 TUSC2O75896 110 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 FCGR2CP31995 323 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 EBI3Q14213 229 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 OR4F5Q8NH21 305 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 OR52I2Q8NH67 350 aa23.66■■□□□ 1.38
HOXB3-208ENST00000476342 RANBP3Q9H6Z4 567 aaPredicted RBP23.66■■□□□ 1.38
HOXB3-208ENST00000476342 FABP12A6NFH5 140 aa23.65■■□□□ 1.38
HOXB3-208ENST00000476342 HLA-DMAP28067 261 aa23.65■■□□□ 1.38
HOXB3-208ENST00000476342 RELBQ01201 579 aa23.65■■□□□ 1.38
HOXB3-208ENST00000476342 OVCH2Q7RTZ1 564 aa23.65■■□□□ 1.38
HOXB3-208ENST00000476342 OR4C13Q8NGP0 309 aa23.65■■□□□ 1.38
HOXB3-208ENST00000476342 TAF15Q92804 592 aaKnown RBP eCLIP23.65■■□□□ 1.38
HOXB3-208ENST00000476342 CTDSPLO15194 276 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 SLC22A5O76082 557 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 Q6ZSV7 163 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 SDHAF2Q9NX18 166 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 KLK11Q9UBX7 282 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 MTFP1Q9UDX5 166 aa23.64■■□□□ 1.37
HOXB3-208ENST00000476342 OR5H14A6NHG9 310 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 ZNF736B4DX44 427 aaPredicted RBP23.63■■□□□ 1.37
HOXB3-208ENST00000476342 J3QRK9 145 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 M0QZK8 103 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 TSPAN9O75954 239 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 MOSP00540 346 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 PMP2P02689 132 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 CT45A6P0DMU7 189 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 CT45A5P0DMU8 189 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 CT45A7P0DMV0 189 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 HRH1P35367 487 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 DYRK1AQ13627 763 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 HNF4GQ14541 408 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 FBLN7Q53RD9 439 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 FAM131AQ6UXB0 335 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 LYSMD2Q8IV50 215 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 ZNF645Q8N7E2 425 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 SMIM4Q8WVI0 70 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 GIMAP1Q8WWP7 306 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 EAF1Q96JC9 268 aaPredicted RBP23.63■■□□□ 1.37
HOXB3-208ENST00000476342 MOB4Q9Y3A3 225 aa23.63■■□□□ 1.37
HOXB3-208ENST00000476342 A0A1B0GUS0 222 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 M0R1X1 148 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 RFX2P48378 723 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 DGCR2P98153 550 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 SSBP1Q04837 148 aaKnown RBP23.62■■□□□ 1.37
HOXB3-208ENST00000476342 ACTBL2Q562R1 376 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 BEX1Q9HBH7 125 aa23.62■■□□□ 1.37
HOXB3-208ENST00000476342 A6NHS1 94 aa23.61■■□□□ 1.37
HOXB3-208ENST00000476342 PROP1O75360 226 aa23.61■■□□□ 1.37
HOXB3-208ENST00000476342 PPYP01298 95 aa23.61■■□□□ 1.37
HOXB3-208ENST00000476342 AADACP22760 399 aa23.61■■□□□ 1.37
HOXB3-208ENST00000476342 MC5RP33032 325 aa23.61■■□□□ 1.37
HOXB3-208ENST00000476342 COMPP49747 757 aaPredicted RBP23.61■■□□□ 1.37
HOXB3-208ENST00000476342 IGKV1D-13A0A0B4J2D9 117 aa23.6■■□□□ 1.37
HOXB3-208ENST00000476342 IGKV1-13P0DP09 117 aa23.6■■□□□ 1.37
HOXB3-208ENST00000476342 DRAXINQ8NBI3 349 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-208ENST00000476342 SOSTQ9BQB4 213 aa23.6■■□□□ 1.37
HOXB3-208ENST00000476342 C16orf95Q9H693 158 aa23.6■■□□□ 1.37
HOXB3-208ENST00000476342 HERV-K104P61576 105 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 AWAT1Q58HT5 328 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 DHRS11Q6UWP2 260 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 GLDNQ6ZMI3 551 aaPredicted RBP23.59■■□□□ 1.37
HOXB3-208ENST00000476342 Q8N6K4 173 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 OR5AN1Q8NGI8 311 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 PRSS22Q9GZN4 317 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 BATF3Q9NR55 127 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 MMP24Q9Y5R2 645 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 H0YJW9 148 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 APOA2P02652 100 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 TBPP20226 339 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 TSPAN5P62079 268 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 OR8H1Q8NGG4 311 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 ZNF2Q9BSG1 426 aaPredicted RBP23.59■■□□□ 1.37
HOXB3-208ENST00000476342 WASHC3Q9Y3C0 194 aa23.59■■□□□ 1.37
HOXB3-208ENST00000476342 FGF16O43320 207 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 MDKP21741 143 aaPredicted RBP23.58■■□□□ 1.36
HOXB3-208ENST00000476342 THBS3P49746 956 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 FXYD4P59646 89 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 SPANXN2Q5MJ10 180 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 C12orf54Q6X4T0 127 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 CCDC190Q86UF4 302 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 OR6Q1Q8NGQ2 317 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 OR6F1Q8NGZ6 308 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 OR2T6Q8NHC8 308 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 SECTM1Q8WVN6 248 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 C5orf30Q96GV9 206 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 ADTRPQ96IZ2 230 aa23.58■■□□□ 1.36
HOXB3-208ENST00000476342 ZNF107Q9UII5 783 aaPredicted RBP23.58■■□□□ 1.36
HOXB3-208ENST00000476342 CLPSL1A2RUU4 121 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 H7C2Y5 167 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 GSTZ1O43708 216 aaPredicted RBP23.57■■□□□ 1.36
HOXB3-208ENST00000476342 TAS2R19P59542 299 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 TAGLNQ01995 201 aaKnown RBP23.57■■□□□ 1.36
HOXB3-208ENST00000476342 RNASE10Q5GAN6 216 aaKnown RBP23.57■■□□□ 1.36
HOXB3-208ENST00000476342 VAX1Q5SQQ9 334 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 ZNF660Q6AZW8 331 aaPredicted RBP23.57■■□□□ 1.36
HOXB3-208ENST00000476342 ZNF383Q8NA42 475 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 LINC01006Q8NI28 216 aa23.57■■□□□ 1.36
HOXB3-208ENST00000476342 NCBP2LA6PVI3 153 aaKnown RBP23.56■■□□□ 1.36
HOXB3-208ENST00000476342 PTBP1P26599 531 aaKnown RBP eCLIP23.56■■□□□ 1.363e-7■■■■■ 51.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms