RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	AKR7A2	O43488	359 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR7A10	O76100	309 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR2F2	O95006	317 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	IGHV1-8	P0DP01	117 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	VDAC1	P21796	283 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	AQP1	P29972	269 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	ALDH3A1	P30838	453 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	DLX6	P56179	175 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR12D2	P58182	307 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	HIST1H3A	P68431	136 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	CKAP4	Q07065	602 aa	Known RBP	3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	PRR4	Q16378	134 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	HIST2H3PS2	Q5TEC6	136 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	ACP7	Q6ZNF0	438 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	HIST2H3A	Q71DI3	136 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	CCDC80	Q76M96	950 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	ZNF429	Q86V71	674 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	TPRA1	Q86W33	373 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	ZNF679	Q8IYX0	411 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR11H1	Q8NG94	326 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	GPR32P1	Q8NGA4	272 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR11H6	Q8NGC7	330 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR4M1	Q8NGD0	313 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR56B2P	Q8NGI1	322 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	KIR2DL4	Q99706	377 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	HDHD2	Q9H0R4	259 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	DNTTIP1	Q9H147	329 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	TLNRD1	Q9H1K6	362 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	VCX2	Q9H322	139 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	THUMPD1	Q9NXG2	353 aa	Known RBP	3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	USE1	Q9NZ43	259 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	STX18	Q9P2W9	335 aa	Known RBP	3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	ZNF222	Q9UK12	451 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	NOP16	Q9Y3C1	178 aa	Known RBP	3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	AK6	Q9Y3D8	172 aa	Known RBP	3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	LHFPL6	Q9Y693	200 aa		3.07	□□□□□ -1.92
PRKD3-208	ENST00000475912	TRAPPC13	A5PLN9	417 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR2AT4	A6NND4	320 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	SERPINE3	A8MV23	424 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	C5orf58	C9J3I9	102 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912		F5H5K5	113 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912		H3BSH0	61 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	CCRL2	O00421	344 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	RS1	O15537	224 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	KRTAP5-8	O75690	187 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	PSG2	P11465	335 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	ZP3	P21754	424 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	GABRA2	P47869	451 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	LSM6	P62312	80 aa	Known RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	RPL31	P62899	125 aa	Known RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	CDK6	Q00534	326 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	LRRC74A	Q0VAA2	488 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	DYNC1I2	Q13409	638 aa	Known RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	DUSP7	Q16829	419 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	MEST	Q5EB52	335 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	GLYATL3	Q5SZD4	288 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	REEP3	Q6NUK4	255 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	MRPL21	Q7Z2W9	205 aa	Known RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	DHDDS	Q86SQ9	333 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	LYPD6	Q86Y78	171 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	NKAIN4	Q8IVV8	208 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	MSRB3	Q8IXL7	192 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	C4orf33	Q8N1A6	199 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	STPG2	Q8N412	459 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	FAM71E2	Q8N5Q1	922 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	DRAM1	Q8N682	238 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR4P4	Q8NGL7	312 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR13D1	Q8NGV5	346 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	NDNF	Q8TB73	568 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	DNAH5	Q8TE73	4624 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	C4orf3	Q8WVX3	66 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	CAPSL	Q8WWF8	208 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	SLC25A38	Q96DW6	304 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	SGTB	Q96EQ0	304 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	COQ2	Q96H96	371 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	NIPSNAP3B	Q9BS92	247 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	FGF23	Q9GZV9	251 aa	Predicted RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	MAGT1	Q9H0U3	335 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	AIG1	Q9NVV5	245 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	WARS2	Q9UGM6	360 aa	Known RBP	3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	RNF213	Q63HN8	5207 aa		3.06	□□□□□ -1.92
PRKD3-208	ENST00000475912	TRAV27	A0A087WT01	109 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	IGHV2-26	A0A0B4J1V2	119 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912		A0A1B0GWB2	263 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	PRSS37	A4D1T9	235 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	PRORSD1P	A6NEY8	169 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	NUPR2	A6NF83	97 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	GGT3P	A6NGU5	568 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912		A6NIZ1	184 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	DCTN6	O00399	190 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	COPE	O14579	308 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	PRKY	O43930	277 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	SLC16A7	O60669	478 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	OR5F1	O95221	314 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	PIP	P12273	146 aa	Predicted RBP	3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	LEP	P41159	167 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	NAA10	P41227	235 aa	Predicted RBP	3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	KIR2DS2	P43631	304 aa		3.05	□□□□□ -1.92
PRKD3-208	ENST00000475912	PRKX	P51817	358 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms