RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CTBP2P56545 445 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 RAB14P61106 215 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 HERVK_113P63121 156 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 PRDX4Q13162 271 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 JOSD1Q15040 202 aaPredicted RBP3.07□□□□□ -1.92
SMC5-203ENST00000475540 LIN52Q52LA3 116 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 HES3Q5TGS1 186 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 BRD3OSQ6XYD6 125 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 TMED4Q7Z7H5 227 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 AMN1Q8IY45 258 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 KRTCAP2Q8N6L1 136 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 LINC00304Q8N9R0 145 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 KCTD4Q8WVF5 259 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 RTN4IP1Q8WWV3 396 aaPredicted RBP3.07□□□□□ -1.92
SMC5-203ENST00000475540 YIPF5Q969M3 257 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 CMBLQ96DG6 245 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 TRIM4Q9C037 500 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 ALX4Q9H161 411 aaPredicted RBP3.07□□□□□ -1.92
SMC5-203ENST00000475540 INIPQ9NRY2 104 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 ZNF391Q9UJN7 358 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 WASHC3Q9Y3C0 194 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 ZNF532Q9HCE3 1301 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 PCF11O94913 1555 aaKnown RBP3.07□□□□□ -1.92
SMC5-203ENST00000475540 CAMSAP1Q5T5Y3 1602 aa3.07□□□□□ -1.92
SMC5-203ENST00000475540 IGKV3D-11A0A0A0MRZ8 115 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 IGHV3-21A0A0B4J1V1 117 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 PQLC2LA1A4F0 135 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 OR5H14A6NHG9 310 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 PSMD12O00232 456 aaPredicted RBP3.06□□□□□ -1.92
SMC5-203ENST00000475540 MRASO14807 208 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 LHBP01229 141 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 FABP1P07148 127 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 CST2P09228 141 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 CTLA4P16410 223 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 PSME3P61289 254 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 HIST1H3AP68431 136 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 H3F3AP84243 136 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 ENDOGQ14249 297 aaKnown RBP3.06□□□□□ -1.92
SMC5-203ENST00000475540 ACOT6Q3I5F7 207 aaPredicted RBP3.06□□□□□ -1.92
SMC5-203ENST00000475540 TMEM42Q69YG0 159 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 C5orf46Q6UWT4 87 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 S100A7AQ86SG5 101 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 DEFB125Q8N687 156 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 MIR7-3HGQ8N6C7 128 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 OR10X1Q8NGY0 326 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 MAL2Q969L2 176 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 MS4A6EQ96DS6 147 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 PYURFQ96I23 114 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 IP6K3Q96PC2 410 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 OR52B2Q96RD2 323 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 C1orf50Q9BV19 199 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 TMEM109Q9BVC6 243 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 DOK5Q9P104 306 aa3.06□□□□□ -1.92
SMC5-203ENST00000475540 LOXHD1Q8IVV2 1947 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 PLCH2O75038 1416 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 IGHV3OR15-7A0A075B7D8 119 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 IGLL5B9A064 214 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 EEF1E1-BLOC1S5C9J1V9 151 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 K7EM74 188 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 PGRMC1O00264 195 aaKnown RBP3.05□□□□□ -1.92
SMC5-203ENST00000475540 EEF1E1O43324 174 aaKnown RBP3.05□□□□□ -1.92
SMC5-203ENST00000475540 GPR75O95800 540 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 MT-CO2P00403 227 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 IGLV3-27P01718 113 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 GYPCP04921 128 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 OR4E1P0C645 316 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 FAM228BP0C875 321 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 CDK2P24941 298 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 GABRA3P34903 492 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 MAP2K4P45985 399 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 RPL19P84098 196 aaKnown RBP3.05□□□□□ -1.92
SMC5-203ENST00000475540 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 FAM201AQ5SY85 155 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 DHRS4L2Q6PKH6 230 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 SBSNQ6UWP8 590 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 CMSS1Q9BQ75 279 aaKnown RBP3.05□□□□□ -1.92
SMC5-203ENST00000475540 DCSTAMPQ9H295 470 aa3.05□□□□□ -1.92
SMC5-203ENST00000475540 NMNAT1Q9HAN9 279 aaPredicted RBP3.05□□□□□ -1.92
SMC5-203ENST00000475540 CCDC144AA2RUR9 1427 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 A0A087WUJ7 227 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 VGLL3A8MV65 326 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 C4orf51C9J302 202 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 PDYNP01213 254 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 TGFBR1P36897 503 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 KRR1Q13601 381 aaKnown RBP3.04□□□□□ -1.92
SMC5-203ENST00000475540 POU6F1Q14863 301 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 SLC9A3R2Q15599 337 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 C1orf194Q5T5A4 169 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 UNQ9165/PRO28630Q6UXU0 137 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 TMEM144Q7Z5S9 345 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 TMEM105Q8N8V8 129 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 LY6G5BQ8NDX9 201 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 OR4A5Q8NH83 315 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 FAM172AQ8WUF8 416 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 BORCS7Q96B45 105 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 SIGMAR1Q99720 223 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 B9D2Q9BPU9 175 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 KIFC1Q9BW19 673 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 FAM96AQ9H5X1 160 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms