RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 SGCZQ96LD1 299 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 JSRP1Q96MG2 331 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-208ENST00000474546 SOX7Q9BT81 388 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 PARLQ9H300 379 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 RBKSQ9H477 322 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF665Q9H7R5 613 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TAAR3PQ9P1P4 343 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 A0A1W2PPQ1 181 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 A0A1W2PR77 199 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 HS3ST1O14792 307 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 MLNRO43193 412 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 SPRY1O43609 319 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-208ENST00000474546 ANGPTL7O43827 346 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 EFNA2O43921 213 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 LIFP15018 202 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TUBG1P23258 451 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 PTGDSP41222 190 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 RUNX1Q01196 453 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 PLGLB1Q02325 96 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 ZFP36L1Q07352 338 aaKnown RBP6.84□□□□□ -1.31
CCDC93-208ENST00000474546 VWC2Q2TAL6 325 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 PIGYQ3MUY2 71 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 FAM69BQ5VUD6 431 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TRAT1Q6PIZ9 186 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM92Q6UXU6 159 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 NAXEQ8NCW5 288 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 NEK7Q8TDX7 302 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
CCDC93-208ENST00000474546 SDSLQ96GA7 329 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 RNF2Q99496 336 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 SPSB2Q99619 263 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 VAMP8Q9BV40 100 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 LINC00470Q9BZP3 86 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 OR2H1Q9GZK4 316 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM106BQ9NUM4 274 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 HSPB7Q9UBY9 170 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 RARRES3Q9UL19 164 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 ATXN7L1Q9ULK2 861 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-208ENST00000474546 POLDIP2Q9Y2S7 368 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 PXMP4Q9Y6I8 212 aa6.84□□□□□ -1.31
CCDC93-208ENST00000474546 ABCA7Q8IZY2 2146 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 LOC102723996A0A087X1L8 192 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 A0A1W2PNR3 127 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF814B7Z6K7 855 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 PRKNO60260 465 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 NXPH2O95156 264 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 CD59P13987 128 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF25P17030 456 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 CD1BP29016 333 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 SRD5A2P31213 254 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ARR3P36575 388 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 SOX8P57073 446 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 NXPH1P58417 271 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RPS20P60866 119 aaKnown RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 GNB2P62879 340 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 Q0VG73 95 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RAB31Q13636 194 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RSPO1Q2MKA7 263 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 SNAI3Q3KNW1 292 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ZNF542PQ5EBM4 170 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 PRAMEF20Q5VT98 475 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 COLCA1Q6ZS62 124 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 AAED1Q7RTV5 226 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 MRPL21Q7Z2W9 205 aaKnown RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 NUFIP2Q7Z417 695 aaKnown RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 TMEM144Q7Z5S9 345 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RTN4RL2Q86UN3 420 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 SHISA5Q8N114 240 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 TSTD1Q8NFU3 115 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR5AU1Q8NGC0 362 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR10G3Q8NGC4 313 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR10G9Q8NGN4 311 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR10G7Q8NGN6 311 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR4F5Q8NH21 305 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR5B3Q8NH48 314 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR51H1Q8NH63 302 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-208ENST00000474546 PIGCQ92535 297 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 CORO2AQ92828 525 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 GPR146Q96CH1 333 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 UHRF2Q96PU4 802 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 OR4F4Q96R69 305 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RASL10BQ96S79 203 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 FOXB1Q99853 325 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 GAL3ST2Q9H3Q3 398 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 CACNG5Q9UF02 275 aa6.83□□□□□ -1.32
CCDC93-208ENST00000474546 CDC42EP3Q9UKI2 254 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms