RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PLXDC1Q8IUK5 500 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 IL1F10Q8WWZ1 152 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 WNT5BQ9H1J7 359 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 MTCH1Q9NZJ7 389 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 OR1A1Q9P1Q5 309 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 SDK2Q58EX2 2172 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 KIAA1549Q9HCM3 1950 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 IGLV3-12A0A075B6K2 115 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 F2Z2F3 143 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 RAET1LQ5VY80 246 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 STPG4Q8N801 248 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 WIPI2Q9Y4P8 454 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 CHCHD2Q9Y6H1 151 aaPredicted RBP15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 SDK1Q7Z5N4 2213 aa15.74■□□□□ 0.11
ECHDC1-214ENST00000474289 C20orf202A1L168 122 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 PDE6DO43924 150 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 DKK1O94907 266 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 TDGF1P13385 188 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 GPM6AP51674 278 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 UBE2G2P60604 165 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 COTL1Q14019 142 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 TMEM147Q9BVK8 224 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 NPCDR1Q9BY65 106 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 OR2H1Q9GZK4 316 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 TRBV20OR9-2A0A075B6H5 130 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 CCL25O15444 150 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 CBR3O75828 277 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 OR4B1Q8NGF8 309 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 OR1L1Q8NH94 360 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 OR6C1Q96RD1 312 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 SAMD10Q9BYL1 202 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 CRIM1Q9NZV1 1036 aa15.73■□□□□ 0.11
ECHDC1-214ENST00000474289 KRASP01116 189 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 SAPCD1Q5SSQ6 148 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 SGCZQ96LD1 299 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 FBXL7Q9UJT9 491 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 MDFIC2A0A1B0GVS7 189 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 DUX1O43812 170 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 TIAF1O95411 115 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 CD27P26842 260 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 CTRLP40313 264 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 ZNF709Q8N972 641 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 OR56B2PQ8NGI1 322 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 C22orf15Q8WYQ4 148 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 SRXN1Q9BYN0 137 aa15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 MRPL18Q9H0U6 180 aaKnown RBP15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 LIN7CQ9NUP9 197 aaKnown RBP15.72■□□□□ 0.11
ECHDC1-214ENST00000474289 LRP5LA4QPB2 252 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 FAM90A26D6RGX4 464 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 KITLGP21583 273 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 CDC34P49427 236 aaPredicted RBP15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 BAGE3Q86Y29 109 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 BAGE2Q86Y30 109 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 Q8N976 141 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 SPSB4Q96A44 273 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 SLC45A2Q9UMX9 530 aa15.71■□□□□ 0.11
ECHDC1-214ENST00000474289 ESPL1Q14674 2120 aa15.71■□□□□ 0.1
ECHDC1-214ENST00000474289 A0A0J9YW62 118 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 FGFRL1Q8N441 504 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 RDH5Q92781 318 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 GAL3ST2Q9H3Q3 398 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 PMS2P5A8MQ11 134 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 F6UZH7 168 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 TRAPPC2LH3BP13 241 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 OR5G3P0C626 314 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 PTTG1IPP53801 180 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 RPS16P62249 146 aaKnown RBP15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 RPP30P78346 268 aaKnown RBP15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 ATP6V1FQ16864 119 aa15.7■□□□□ 0.1
ECHDC1-214ENST00000474289 WDR1O75083 606 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 TIMP3P35625 211 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 KRTDAPP60985 99 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 SPATA45Q537H7 98 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 LEMD1Q68G75 181 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 SAXO1Q8IYX7 474 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 PSMF1Q92530 271 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 KCNIP2Q9NS61 270 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 CLN8Q9UBY8 286 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 KCNS2Q9ULS6 477 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 CABIN1Q9Y6J0 2220 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 ADAMTS20P59510 1910 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 TRBV6-6A0A0A6YYG2 114 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 SYNGR4O95473 234 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 HNF1AP20823 631 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 HLA-BQ31612 363 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 WDR74Q6RFH5 385 aaPredicted RBP15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 TSTD1Q8NFU3 115 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 CPT1CQ8TCG5 803 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 RNF2Q99496 336 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 FOXB1Q99853 325 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 FAM103A1Q9BTL3 118 aaKnown RBP15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 DEFB126Q9BYW3 111 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 HSPB7Q9UBY9 170 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 CEP290O15078 2479 aa15.69■□□□□ 0.1
ECHDC1-214ENST00000474289 TRAV24A0A0B4J272 114 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 DIRC3C9JPN6 131 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 C3orf80F5H4A9 247 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 THBS3P49746 956 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNF90Q03938 601 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms