RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 MADDQ8WXG6 1647 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 NPIPB6E9PJ23 425 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 DUX1O43812 170 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 CD46P15529 392 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 ZNF708P17019 499 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 CYB561P49447 251 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 TMEM40Q8WWA1 233 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 C11orf40Q8WZ69 217 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 STARD5Q9NSY2 213 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 IL36GQ9NZH8 169 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 KIF1BO60333 1816 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 MSGN1A6NI15 193 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 K7EQS6 105 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 NGFP01138 241 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 ANKRD33Q7Z3H0 272 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 DMRTC2Q8IXT2 367 aaPredicted RBP7.8□□□□□ -1.16
COL6A3-210ENST00000473258 AGBL5Q8NDL9 886 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 DCCP43146 1447 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 hADV38S2A0JD32 116 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 FFAR1O14842 300 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 HSD11B1LQ7Z5J1 315 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 SMIM14Q96QK8 99 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 MRM2Q9UI43 246 aaKnown RBP7.8□□□□□ -1.16
COL6A3-210ENST00000473258 SLC25A15Q9Y619 301 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 IGKV6D-41A0A0C4DH26 115 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 A0A1W2PQU0 124 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 LRRC30A6NM36 301 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 H3BTX0 84 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 CDC42EP2O14613 210 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 DPM2O94777 84 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 CD38P28907 300 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 RPL31P62899 125 aaKnown RBP7.8□□□□□ -1.16
COL6A3-210ENST00000473258 CD200R1LQ6Q8B3 271 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 Q8IYB0 196 aa7.8□□□□□ -1.16
COL6A3-210ENST00000473258 AMMECR1Q9Y4X0 333 aaPredicted RBP7.8□□□□□ -1.16
COL6A3-210ENST00000473258 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 H0YGG7 62 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 C3orf79P0CE67 100 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 ARL14EPLP0DKL9 152 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 CCL5P13501 91 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 OR4D11Q8NGI4 311 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 GNB1LQ9BYB4 327 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 IZUMO1RA6ND01 250 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 CDX4O14627 284 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 SLC25A28Q96A46 364 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 MYEOVQ96EZ4 313 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 OR2H1Q9GZK4 316 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 RARRES3Q9UL19 164 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 INSL6Q9Y581 213 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 A0A087WUJ7 227 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 WNT10BO00744 389 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 HYPMO75409 117 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 GUSBP1Q15486 140 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 PLXDC1Q8IUK5 500 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 CHCHD1Q96BP2 118 aaKnown RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 SOSTQ9BQB4 213 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 RGRP47804 291 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 C8orf82Q6P1X6 216 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 TMEM256Q8N2U0 113 aa7.79□□□□□ -1.16
COL6A3-210ENST00000473258 ZNF784Q8NCA9 323 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 MARS2Q96GW9 593 aaKnown RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 ALKBH3Q96Q83 286 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-210ENST00000473258 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 SHISA7A6NL88 538 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 C22orf46C9J442 243 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 PLAUP00749 431 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 IGFBP2P18065 325 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 GLRXP35754 106 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 PSG6Q00889 435 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 CT83Q5H943 113 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 C10orf128Q5T292 105 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 LINC01551Q86U37 167 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 VKORC1Q9BQB6 163 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 ZNF391Q9UJN7 358 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 KLF2Q9Y5W3 355 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-210ENST00000473258 A0A1B0GTL3 188 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 A0A1W2PQF6 199 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 PGPA6NDG6 321 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 CCL25O15444 150 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 GHRHP01286 108 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 ICAM4Q14773 271 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 C16orf54Q6UWD8 224 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 GOLT1AQ6ZVE7 132 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 WBP1LQ9NX94 342 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 C1orf61Q13536 156 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 TBR1Q16650 682 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 CDCP2Q5VXM1 449 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 C12orf49Q9H741 205 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 ZNF703Q9H7S9 590 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-210ENST00000473258 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 NDUFA3O95167 84 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 DLX6P56179 175 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms