RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 K7N7A8 449 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PSG2P11465 335 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CTGFP29279 349 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 LTBRP36941 435 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 hCG_38984A0A1B0GV85 526 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 C21orf140B9A014 251 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CKS2P33552 79 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MANBALQ9NQG1 85 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PAXXQ9BUH6 204 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MIOXQ9UGB7 285 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3-66A0A0C4DH42 116 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SMIM18P0DKX4 95 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CXCL10P02778 98 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PGA4P0DJD7 388 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PGA5P0DJD9 388 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DCAF10Q5QP82 559 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TMEM229AB2RXF0 380 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MVDP53602 400 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FAM106AQ4KMX7 169 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 C17orf47Q8NEP4 570 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 HDHD3Q9BSH5 251 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CGB3P0DN86 165 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF770Q6IQ21 691 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 LEAP2Q969E1 77 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PITPNC1Q9UKF7 332 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR4C45A6NMZ5 311 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CEACAM18A8MTB9 384 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF415Q09FC8 603 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RBKSQ9H477 322 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 EREGO14944 169 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MTURNQ8N3F0 131 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 STPG3Q8N7X2 389 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PRNDQ9UKY0 176 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 C9JCJ5 164 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ZNF25P17030 456 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PRSS53Q2L4Q9 553 aa11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MRM1Q6IN84 353 aaKnown RBP11.54□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PPYP01298 95 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CELA2AP08217 269 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 C1orf185Q5T7R7 199 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 DRD3P35462 400 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IL13RA2Q14627 380 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CTF1Q16619 201 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ERASQ7Z444 233 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR10AG1Q8NH19 301 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MFAP2P55001 183 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TRGV2A0A075B6R0 118 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PRR19A6NJB7 356 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 NDUFB6O95139 128 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GPX1P07203 203 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 NOVP48745 357 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 FLRT3Q9NZU0 649 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CDC42EP2O14613 210 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 PLPP2O43688 288 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OTX1P32242 354 aaPredicted RBP11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TEX30Q5JUR7 227 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 CST9LQ9H4G1 147 aa11.53□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 TCRBV5S2A0A599 114 aa11.52□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 MZB1Q8WU39 189 aa11.52□□□□□ -0.56
NPHP3-ACAD11-201ENST00000471702 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM189A5PLL7 270 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CYB5R3P00387 301 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TSPOP30536 169 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DTX2Q86UW9 622 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LPAR3Q9UBY5 353 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MTFP1Q9UDX5 166 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MBD1Q9UIS9 605 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PROB1E7EW31 1015 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 H3BTX0 84 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 IGLV3-25P01717 112 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PGLYRP3Q96LB9 341 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ISG15P05161 165 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SLC52A3Q9NQ40 469 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TRBV5-4A0A0C4DH59 114 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms