RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CCDC59Q9P031 241 aaKnown RBP12.16□□□□□ -0.46
SDC3-203ENST00000471567 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 OR2W1Q9Y3N9 320 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 RBM7Q9Y580 266 aaKnown RBP12.16□□□□□ -0.46
SDC3-203ENST00000471567 CEPT1Q9Y6K0 416 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 ANK2Q01484 3957 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 NCBP2LA6PVI3 153 aaKnown RBP12.15□□□□□ -0.46
SDC3-203ENST00000471567 FAM25AB3EWG3 89 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 FAM25CB3EWG5 89 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 FAM25GB3EWG6 89 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 KRTAP10-3P60369 221 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 Q8N9W7 124 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 WNT10AQ9GZT5 417 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 OR2D2Q9H210 308 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
SDC3-203ENST00000471567 NECAP2Q9NVZ3 263 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 ADAM30Q9UKF2 790 aa12.15□□□□□ -0.46
SDC3-203ENST00000471567 MRPS7Q9Y2R9 242 aaKnown RBP12.15□□□□□ -0.46
SDC3-203ENST00000471567 H0YJW9 148 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 SULT1C2O00338 296 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 PEX14O75381 377 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 RBBP9O75884 186 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 TUSC2O75896 110 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 SLC22A5O76082 557 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 NAT1P18440 290 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
SDC3-203ENST00000471567 LUMP51884 338 aaPredicted RBP12.14□□□□□ -0.47
SDC3-203ENST00000471567 FAM131AQ6UXB0 335 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 OR5AP2Q8NGF4 316 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 C15orf40Q8WUR7 153 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 RNF5Q99942 180 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
SDC3-203ENST00000471567 MEIS3P1A6NDR6 274 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 M0R1X1 148 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 OR5H8P0DN80 308 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 F2RL1P55085 397 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 ACTBP60709 375 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 TAGLNQ01995 201 aaKnown RBP12.13□□□□□ -0.47
SDC3-203ENST00000471567 SRSF4Q08170 494 aaKnown RBP12.13□□□□□ -0.47
SDC3-203ENST00000471567 CDK10Q15131 360 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 GLDNQ6ZMI3 551 aaPredicted RBP12.13□□□□□ -0.47
SDC3-203ENST00000471567 FAM71E2Q8N5Q1 922 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 ZNF383Q8NA42 475 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 EXTL2Q9UBQ6 330 aa12.13□□□□□ -0.47
SDC3-203ENST00000471567 SH2D7A6NKC9 451 aaPredicted RBP12.12□□□□□ -0.47
SDC3-203ENST00000471567 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
SDC3-203ENST00000471567 CTDSP2O14595 271 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 RGS5O15539 181 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 IGHG2P01859 326 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 APOA2P02652 100 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 THBS3P49746 956 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 TAS2R46P59540 309 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 MMDQ15546 238 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 SNX29P2Q8IUI4 249 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 DRAXINQ8NBI3 349 aaPredicted RBP12.12□□□□□ -0.47
SDC3-203ENST00000471567 NPBQ8NG41 125 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 WIPF2Q8TF74 440 aaPredicted RBP12.12□□□□□ -0.47
SDC3-203ENST00000471567 GIMAP1Q8WWP7 306 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 ADTRPQ96IZ2 230 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 RBM38Q9H0Z9 239 aaKnown RBP12.12□□□□□ -0.47
SDC3-203ENST00000471567 MIXL1Q9H2W2 232 aa12.12□□□□□ -0.47
SDC3-203ENST00000471567 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 H7C2Y5 167 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 NBR2O15453 112 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 NDUFA3O95167 84 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 FCGR2CP31995 323 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 MSMO1Q15800 293 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 OVCH2Q7RTZ1 564 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 RITA1Q96K30 269 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 SLIRPQ9GZT3 109 aaKnown RBP12.11□□□□□ -0.47
SDC3-203ENST00000471567 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 RABL2AQ9UBK7 228 aaPredicted RBP12.11□□□□□ -0.47
SDC3-203ENST00000471567 RSL24D1Q9UHA3 163 aaKnown RBP12.11□□□□□ -0.47
SDC3-203ENST00000471567 RABL2BQ9UNT1 228 aa12.11□□□□□ -0.47
SDC3-203ENST00000471567 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 J3QRK9 145 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 KCNAB3O43448 404 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 FCER2P06734 321 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 RRASP10301 218 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
SDC3-203ENST00000471567 RCVRNP35243 200 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 DHRS11Q6UWP2 260 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
SDC3-203ENST00000471567 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms