RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 S4R3C0 116 aa5.14□□□□□ -1.59
HDAC1-204ENST00000471488 TMEM212A6NML5 194 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 G3V2T6 193 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 H0YJW9 148 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 DEFB4AO15263 64 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 CRTAPO75718 401 aaPredicted RBP5.13□□□□□ -1.59
HDAC1-204ENST00000471488 RBBP9O75884 186 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 OR2C1O95371 312 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 APOA2P02652 100 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 IGKV1-16P04430 117 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 CD2P06729 351 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 BDKRB2P30411 391 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 KIR2DS2P43631 304 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 LINC00205P59089 165 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 RHOGP84095 191 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 MED22Q15528 200 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 TNXAQ16473 311 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ANKRD55Q3KP44 614 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 DMKNQ6E0U4 476 aaPredicted RBP5.13□□□□□ -1.59
HDAC1-204ENST00000471488 BTNL8Q6UX41 500 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 PARP16Q8N5Y8 322 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 OR1L6Q8NGR2 347 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 OR5B3Q8NH48 314 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 C11orf45Q8TAV5 145 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ACOT12Q8WYK0 555 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 MUL1Q969V5 352 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 FAM46BQ96A09 425 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ASB9Q96DX5 294 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF184Q99676 751 aaPredicted RBP5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ALG8Q9BVK2 526 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 IFI27L2Q9H2X8 130 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 IFT22Q9H7X7 185 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 ZC4H2Q9NQZ6 224 aa5.13□□□□□ -1.59
HDAC1-204ENST00000471488 TECRQ9NZ01 308 aaKnown RBP5.13□□□□□ -1.59
HDAC1-204ENST00000471488 MSGN1A6NI15 193 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 FAM90A23PA8MXZ1 464 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 E9PI62 339 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 SNX3O60493 162 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 YPEL1O60688 119 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF780AO75290 641 aaPredicted RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 DCTN3O75935 186 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 OR2J3O76001 311 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 CBLN1P23435 193 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 FCGR2BP31994 310 aaPredicted RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 POLR2IP36954 125 aaKnown RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 MECP2P51608 486 aaKnown RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 GBX2P52951 348 aaPredicted RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 TAGLNQ01995 201 aaKnown RBP5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF45Q02386 682 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 FLOT2Q14254 428 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 NHLRC3Q5JS37 347 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 SLC25A30Q5SVS4 291 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 FDX2Q6P4F2 183 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 GLIPR1L1Q6UWM5 242 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF575Q86XF7 245 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 SLC38A6Q8IZM9 456 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ARHGAP24Q8N264 748 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ACBD7Q8N6N7 88 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 UXS1Q8NBZ7 420 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 OR8J1Q8NGP2 316 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 KCNG3Q8TAE7 436 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 HARBI1Q96MB7 349 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 YPEL2Q96QA6 119 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 JAM3Q9BX67 310 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 MFFQ9GZY8 342 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 TMEM138Q9NPI0 162 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 AKIP1Q9NQ31 210 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 SLC35D1Q9NTN3 355 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 IL36GQ9NZH8 169 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF221Q9UK13 617 aa5.12□□□□□ -1.59
HDAC1-204ENST00000471488 IGHV3-35A0A0C4DH35 117 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 A0A1W2PPK0 400 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 AQP12BA6NM10 295 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 M0R1X1 148 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 SHOXO15266 292 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 RBMXL2O75526 392 aaKnown RBP5.11□□□□□ -1.59
HDAC1-204ENST00000471488 OR9G9P0C7N8 305 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 FUT3P21217 361 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 FASP25445 335 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 ARL3P36405 182 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 GTF2A1P52655 376 aaPredicted RBP5.11□□□□□ -1.59
HDAC1-204ENST00000471488 HTD2P86397 168 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 EFNB1P98172 346 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 CBX3Q13185 183 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 GPR176Q14439 515 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 C15orf32Q32M92 178 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF585BQ52M93 769 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 TMEM177Q53S58 311 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 IDO2Q6ZQW0 420 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 Q6ZWC4 215 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 AQP12AQ8IXF9 295 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 CENPSQ8N2Z9 138 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 MRPL30Q8TCC3 161 aaKnown RBP5.11□□□□□ -1.59
HDAC1-204ENST00000471488 GPR148Q8TDV2 347 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 CIB1Q99828 191 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 RARRES2Q99969 163 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 CKLFQ9UBR5 152 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 MLXQ9UH92 298 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms