RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 CTDSP1Q9GZU7 261 aa16.95■□□□□ 0.3
CDHR3-207ENST00000470188 RNF115Q9Y4L5 304 aa16.95■□□□□ 0.3
CDHR3-207ENST00000470188 DVL1O14640 695 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 SELLP14151 372 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 COX5AP20674 150 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 IL2RGP31785 369 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 FIP1L1Q6UN15 594 aaKnown RBP16.94■□□□□ 0.3
CDHR3-207ENST00000470188 TMEM217Q8N7C4 229 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 RNASEH2CQ8TDP1 164 aaKnown RBP16.94■□□□□ 0.3
CDHR3-207ENST00000470188 SARAFQ96BY9 339 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 MBNL3Q9NUK0 354 aaKnown RBP16.94■□□□□ 0.3
CDHR3-207ENST00000470188 OR14J1Q9UGF5 321 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 PPP1R3CQ9UQK1 317 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 HAND1O96004 215 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 IGKV3-15P01624 115 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 SLC25A6P12236 298 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 RAB11AP62491 216 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 WDR31Q8NA23 367 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 WIPI2Q9Y4P8 454 aa16.94■□□□□ 0.3
CDHR3-207ENST00000470188 FGF7P21781 194 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 CEACAM6P40199 344 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 JOSD1Q15040 202 aaPredicted RBP16.93■□□□□ 0.3
CDHR3-207ENST00000470188 TMEM183AQ8IXX5 376 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 C1orf162Q8NEQ5 155 aaPredicted RBP16.93■□□□□ 0.3
CDHR3-207ENST00000470188 P2RX4Q99571 388 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 LRFN3Q9BTN0 628 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 GNG13Q9P2W3 67 aa16.93■□□□□ 0.3
CDHR3-207ENST00000470188 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-207ENST00000470188 IFNA5P01569 189 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 BCL2P10415 239 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 CEBPDP49716 269 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-207ENST00000470188 PAX9P55771 341 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 PRO1933Q9H354 126 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 HES4Q9HCC6 221 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 SDF2L1Q9HCN8 221 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 MLNRO43193 412 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-207ENST00000470188 NOL4LQ96MY1 436 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-207ENST00000470188 RNF150Q9ULK6 438 aa16.92■□□□□ 0.3
CDHR3-207ENST00000470188 MUC6Q6W4X9 2439 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 IGKV1-39P01597 117 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 IGKV1D-39P04432 117 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 SSX2Q16385 188 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 IZUMO4Q1ZYL8 232 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 CXorf67Q86X51 503 aaPredicted RBP16.91■□□□□ 0.3
CDHR3-207ENST00000470188 SSX3Q99909 188 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 LIN7CQ9NUP9 197 aaKnown RBP16.91■□□□□ 0.3
CDHR3-207ENST00000470188 ZNF16P17020 682 aaPredicted RBP16.91■□□□□ 0.3
CDHR3-207ENST00000470188 RAB4BP61018 213 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 FOXF2Q12947 444 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 DEFB109BQ30KR1 87 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 ZNF826PQ6ZT77 177 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 MBD3L1Q8WWY6 194 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 LSM10Q969L4 123 aaKnown RBP16.91■□□□□ 0.3
CDHR3-207ENST00000470188 SNX22Q96L94 193 aa16.91■□□□□ 0.3
CDHR3-207ENST00000470188 TMEM30CPA0ZSE6 113 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 PSPNO60542 156 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 WDR1O75083 606 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 ZNF124Q15973 351 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 C4orf17Q53FE4 359 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 UNQ6494/PRO21346Q6UXR6 183 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 Q6ZRM9 215 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 OR10A7Q8NGE5 316 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 RAB24Q969Q5 203 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 RAB40CQ96S21 281 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 CXXC4Q9H2H0 198 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 KCNIP1Q9NZI2 227 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 CACNG5Q9UF02 275 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 TP53TG5Q9Y2B4 290 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 LOC400499M0QZD8 3231 aa16.9■□□□□ 0.3
CDHR3-207ENST00000470188 KIAA1324LA8MWY0 1029 aaPredicted RBP16.89■□□□□ 0.3
CDHR3-207ENST00000470188 WNT9BO14905 357 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 TIMM8AO60220 97 aaPredicted RBP16.89■□□□□ 0.3
CDHR3-207ENST00000470188 CECR9P0C854 216 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 NDUFB7P17568 137 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 ZNF787Q6DD87 383 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 THNSL2Q86YJ6 484 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 LILRB2Q8N423 598 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 ACTR3CQ9C0K3 210 aaPredicted RBP16.89■□□□□ 0.3
CDHR3-207ENST00000470188 SRD5A3Q9H8P0 318 aa16.89■□□□□ 0.3
CDHR3-207ENST00000470188 H3BP45 60 aa16.89■□□□□ 0.29
CDHR3-207ENST00000470188 SLC25A24Q6NUK1 477 aa16.89■□□□□ 0.29
CDHR3-207ENST00000470188 C11orf53Q8IXP5 236 aa16.89■□□□□ 0.29
CDHR3-207ENST00000470188 DRAM1Q8N682 238 aa16.89■□□□□ 0.29
CDHR3-207ENST00000470188 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
CDHR3-207ENST00000470188 IGKV1-5P01602 117 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 SPCS3P61009 180 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 ZNF585BQ52M93 769 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 ZNF295-AS1Q8N0V1 137 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 CA5BP1Q8WTZ4 195 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 PLSCR4Q9NRQ2 329 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 FZR1Q9UM11 496 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 PRRC2CQ9Y520 2896 aaKnown RBP16.88■□□□□ 0.29
CDHR3-207ENST00000470188 ZFP92A6NM28 416 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 A8MWP6 167 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 COA6Q5JTJ3 125 aaKnown RBP16.88■□□□□ 0.29
CDHR3-207ENST00000470188 DMRTC2Q8IXT2 367 aaPredicted RBP16.88■□□□□ 0.29
CDHR3-207ENST00000470188 BEND2Q8NDZ0 799 aa16.88■□□□□ 0.29
CDHR3-207ENST00000470188 OR4X1Q8NH49 305 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms