RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF680Q8NEM1 530 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 CT45A3Q8NHU0 189 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 HSD17B10Q99714 261 aaKnown RBP14.93□□□□□ -0.02
SMC4-211ENST00000469858 KANTRA0A1W2PQU2 76 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 MSGN1A6NI15 193 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 C17orf98A8MV24 154 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 ITGB1BP1O14713 200 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 PROP1O75360 226 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 CFDP00746 253 aaPredicted RBP14.93□□□□□ -0.02
SMC4-211ENST00000469858 NUP62P37198 522 aaPredicted RBP14.93□□□□□ -0.02
SMC4-211ENST00000469858 LPAR6P43657 344 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 MRPS11P82912 194 aaKnown RBP14.93□□□□□ -0.02
SMC4-211ENST00000469858 ZNF816Q0VGE8 651 aaPredicted RBP14.93□□□□□ -0.02
SMC4-211ENST00000469858 ESCO2Q56NI9 601 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 SPAG16Q8N0X2 631 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 TIMD4Q96H15 378 aa14.93□□□□□ -0.02
SMC4-211ENST00000469858 M0R1X1 148 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 ST8SIA3O43173 380 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 IZUMO4Q1ZYL8 232 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 ZNF439Q8NDP4 499 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 RAB1CQ92928 201 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 GPR146Q96CH1 333 aa14.92□□□□□ -0.02
SMC4-211ENST00000469858 CLEC18AA5D8T8 446 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 IGKV1-5P01602 117 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 NKX2-1P43699 371 aaPredicted RBP14.91□□□□□ -0.02
SMC4-211ENST00000469858 EXOSC2Q13868 293 aaKnown RBP14.91□□□□□ -0.02
SMC4-211ENST00000469858 HEPN1Q6WQI6 88 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 CLEC18CQ8NCF0 446 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 BCL2L11O43521 198 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 NDUFS7O75251 213 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 NXPH3O95157 252 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 DUTP33316 252 aaKnown RBP14.91□□□□□ -0.02
SMC4-211ENST00000469858 BRWD1-AS2P59051 145 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 ZNF841Q6ZN19 808 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 LYG1Q8N1E2 194 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 OR10A7Q8NGE5 316 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 LSM10Q969L4 123 aaKnown RBP14.91□□□□□ -0.02
SMC4-211ENST00000469858 CHODLQ9H9P2 273 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 ZFP57Q9NU63 452 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 POMT1Q9Y6A1 747 aa14.91□□□□□ -0.02
SMC4-211ENST00000469858 ZNF462Q96JM2 2506 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 SAA2-SAA4A0A096LPE2 208 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 S1PR2O95136 353 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 IFNA7P01567 189 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 SAA2P0DJI9 122 aaPredicted RBP14.9□□□□□ -0.02
SMC4-211ENST00000469858 CXorf66Q5JRM2 361 aaPredicted RBP14.9□□□□□ -0.02
SMC4-211ENST00000469858 NCR3LG1Q68D85 454 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 AQP10Q96PS8 301 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 RCL1Q9Y2P8 373 aaKnown RBP14.9□□□□□ -0.02
SMC4-211ENST00000469858 DOPEY1Q5JWR5 2465 aa14.9□□□□□ -0.02
SMC4-211ENST00000469858 TRBV23-1A0A0A0MS06 115 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 RAB29O14966 203 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 SPDEFO95238 335 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 TMEM155Q4W5P6 130 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 C1orf229Q6ZS94 237 aaPredicted RBP14.89□□□□□ -0.03
SMC4-211ENST00000469858 SLC51BQ86UW2 128 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 TCTEX1D1Q8N7M0 179 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 OR8B3Q8NGG8 313 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 OR8B2Q96RD0 313 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 ZC4H2Q9NQZ6 224 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 ZNRD1Q9P1U0 126 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 CACNG5Q9UF02 275 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 MIOXQ9UGB7 285 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 A0A1B0GU03 582 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 E5RGE8 158 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 ATP6V1G1O75348 118 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 HTR2BP41595 481 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 POLR2GP62487 172 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMC4-211ENST00000469858 Q6ZRM9 215 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 SLC25A48Q6ZT89 311 aaKnown RBP14.89□□□□□ -0.03
SMC4-211ENST00000469858 ODF3L1Q8IXM7 274 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
SMC4-211ENST00000469858 ARPC5LQ9BPX5 153 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 ZNF471Q9BX82 626 aaPredicted RBP14.89□□□□□ -0.03
SMC4-211ENST00000469858 MAGT1Q9H0U3 335 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 NARFLQ9H6Q4 476 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 NSG2Q9Y328 171 aa14.89□□□□□ -0.03
SMC4-211ENST00000469858 KLF2Q9Y5W3 355 aaPredicted RBP14.89□□□□□ -0.03
SMC4-211ENST00000469858 MALRD1Q5VYJ5 2156 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 KRASP01116 189 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 HKR1P10072 659 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 SLC25A6P12236 298 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 G6PCP35575 357 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 DLX6P56179 175 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.88□□□□□ -0.03
SMC4-211ENST00000469858 FAM212BQ9NTI7 297 aaPredicted RBP14.88□□□□□ -0.03
SMC4-211ENST00000469858 UBQLN2Q9UHD9 624 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 GAB2Q9UQC2 676 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 FLNCQ14315 2725 aa14.88□□□□□ -0.03
SMC4-211ENST00000469858 USP9XQ93008 2570 aaPredicted RBP14.88□□□□□ -0.03
SMC4-211ENST00000469858 SPTAN1Q13813 2472 aaKnown RBP14.88□□□□□ -0.03
SMC4-211ENST00000469858 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
SMC4-211ENST00000469858 SSSCA1O60232 199 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 FCGR3BO75015 233 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 RPL12P30050 165 aaKnown RBP14.87□□□□□ -0.03
SMC4-211ENST00000469858 DMBX1Q8NFW5 382 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 COL12A1Q99715 3063 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 PITX3O75364 302 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 GOSR1O95249 250 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 F12P00748 615 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms